Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy

Detalhes bibliográficos
Autor(a) principal: Sousa, Pedro N.
Data de Publicação: 2017
Outros Autores: Calado, Cecília
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.21/7477
Resumo: This study shows the application of the Fourier transform mid-infrared spectroscopy (FT-MIR) associated with high-throughput technology to study the biochemical fingerprints of different Saccharomyces cerevisiae strains transformed with the same expression system along the similar cultivation in bioreactor. The phenotype, as well as the cellular metabolism and recombinant cyprosin biosynthesis, were determined. The differences observed were confirmed by conventional cyprosin activity protocol, and the metabolic evolution was analyzed using high-performance liquid chromatography technique. The spectral analysis based on chemometrics tools, such as the principal component analysis, is a useful methodology for the phenotypes characterization as well as the specific metabolic states along the cultivations according to the clusters created. The ratio bands of spectra also represented a useful tool to evaluate the metabolic and biochemical differences between both expression systems, allowing to have an additional parameter to the biomolecular comparison. Therefore, high-throughput FT-MIR spectroscopy associated with multivariate data analysis represent a valuable strategy for extracting significant specific biomolecular information along the cultivation, providing a complete bioprocess analysis, once it detects slight molecular changes which it will be useful for screening and optimization process in the biotechnological or pharmaceutical industry.
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spelling Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopyFT-MIR spectroscopyHigh-throughput analysisPrincipal components analysisRecombinant cyprosin BScreening processThis study shows the application of the Fourier transform mid-infrared spectroscopy (FT-MIR) associated with high-throughput technology to study the biochemical fingerprints of different Saccharomyces cerevisiae strains transformed with the same expression system along the similar cultivation in bioreactor. The phenotype, as well as the cellular metabolism and recombinant cyprosin biosynthesis, were determined. The differences observed were confirmed by conventional cyprosin activity protocol, and the metabolic evolution was analyzed using high-performance liquid chromatography technique. The spectral analysis based on chemometrics tools, such as the principal component analysis, is a useful methodology for the phenotypes characterization as well as the specific metabolic states along the cultivations according to the clusters created. The ratio bands of spectra also represented a useful tool to evaluate the metabolic and biochemical differences between both expression systems, allowing to have an additional parameter to the biomolecular comparison. Therefore, high-throughput FT-MIR spectroscopy associated with multivariate data analysis represent a valuable strategy for extracting significant specific biomolecular information along the cultivation, providing a complete bioprocess analysis, once it detects slight molecular changes which it will be useful for screening and optimization process in the biotechnological or pharmaceutical industry.Elsevier ScienceRCIPLSousa, Pedro N.Calado, Cecília2017-11-10T10:21:03Z2017-102017-10-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.21/7477engSAMPAIO, Pedro N. Sousa; CALADO, Cecília Ribeiro da Cruz - Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy. Journal of Biotechnology. ISSN 0168-1656. Vol. 260 (2017), pp. 1-100168-165610.1016/j.jbiotec.2017.08.020metadata only accessinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-08-03T09:53:35Zoai:repositorio.ipl.pt:10400.21/7477Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:16:25.167446Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy
title Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy
spellingShingle Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy
Sousa, Pedro N.
FT-MIR spectroscopy
High-throughput analysis
Principal components analysis
Recombinant cyprosin B
Screening process
title_short Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy
title_full Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy
title_fullStr Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy
title_full_unstemmed Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy
title_sort Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy
author Sousa, Pedro N.
author_facet Sousa, Pedro N.
Calado, Cecília
author_role author
author2 Calado, Cecília
author2_role author
dc.contributor.none.fl_str_mv RCIPL
dc.contributor.author.fl_str_mv Sousa, Pedro N.
Calado, Cecília
dc.subject.por.fl_str_mv FT-MIR spectroscopy
High-throughput analysis
Principal components analysis
Recombinant cyprosin B
Screening process
topic FT-MIR spectroscopy
High-throughput analysis
Principal components analysis
Recombinant cyprosin B
Screening process
description This study shows the application of the Fourier transform mid-infrared spectroscopy (FT-MIR) associated with high-throughput technology to study the biochemical fingerprints of different Saccharomyces cerevisiae strains transformed with the same expression system along the similar cultivation in bioreactor. The phenotype, as well as the cellular metabolism and recombinant cyprosin biosynthesis, were determined. The differences observed were confirmed by conventional cyprosin activity protocol, and the metabolic evolution was analyzed using high-performance liquid chromatography technique. The spectral analysis based on chemometrics tools, such as the principal component analysis, is a useful methodology for the phenotypes characterization as well as the specific metabolic states along the cultivations according to the clusters created. The ratio bands of spectra also represented a useful tool to evaluate the metabolic and biochemical differences between both expression systems, allowing to have an additional parameter to the biomolecular comparison. Therefore, high-throughput FT-MIR spectroscopy associated with multivariate data analysis represent a valuable strategy for extracting significant specific biomolecular information along the cultivation, providing a complete bioprocess analysis, once it detects slight molecular changes which it will be useful for screening and optimization process in the biotechnological or pharmaceutical industry.
publishDate 2017
dc.date.none.fl_str_mv 2017-11-10T10:21:03Z
2017-10
2017-10-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.21/7477
url http://hdl.handle.net/10400.21/7477
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv SAMPAIO, Pedro N. Sousa; CALADO, Cecília Ribeiro da Cruz - Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy. Journal of Biotechnology. ISSN 0168-1656. Vol. 260 (2017), pp. 1-10
0168-1656
10.1016/j.jbiotec.2017.08.020
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dc.publisher.none.fl_str_mv Elsevier Science
publisher.none.fl_str_mv Elsevier Science
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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