Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.21/7477 |
Resumo: | This study shows the application of the Fourier transform mid-infrared spectroscopy (FT-MIR) associated with high-throughput technology to study the biochemical fingerprints of different Saccharomyces cerevisiae strains transformed with the same expression system along the similar cultivation in bioreactor. The phenotype, as well as the cellular metabolism and recombinant cyprosin biosynthesis, were determined. The differences observed were confirmed by conventional cyprosin activity protocol, and the metabolic evolution was analyzed using high-performance liquid chromatography technique. The spectral analysis based on chemometrics tools, such as the principal component analysis, is a useful methodology for the phenotypes characterization as well as the specific metabolic states along the cultivations according to the clusters created. The ratio bands of spectra also represented a useful tool to evaluate the metabolic and biochemical differences between both expression systems, allowing to have an additional parameter to the biomolecular comparison. Therefore, high-throughput FT-MIR spectroscopy associated with multivariate data analysis represent a valuable strategy for extracting significant specific biomolecular information along the cultivation, providing a complete bioprocess analysis, once it detects slight molecular changes which it will be useful for screening and optimization process in the biotechnological or pharmaceutical industry. |
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Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopyFT-MIR spectroscopyHigh-throughput analysisPrincipal components analysisRecombinant cyprosin BScreening processThis study shows the application of the Fourier transform mid-infrared spectroscopy (FT-MIR) associated with high-throughput technology to study the biochemical fingerprints of different Saccharomyces cerevisiae strains transformed with the same expression system along the similar cultivation in bioreactor. The phenotype, as well as the cellular metabolism and recombinant cyprosin biosynthesis, were determined. The differences observed were confirmed by conventional cyprosin activity protocol, and the metabolic evolution was analyzed using high-performance liquid chromatography technique. The spectral analysis based on chemometrics tools, such as the principal component analysis, is a useful methodology for the phenotypes characterization as well as the specific metabolic states along the cultivations according to the clusters created. The ratio bands of spectra also represented a useful tool to evaluate the metabolic and biochemical differences between both expression systems, allowing to have an additional parameter to the biomolecular comparison. Therefore, high-throughput FT-MIR spectroscopy associated with multivariate data analysis represent a valuable strategy for extracting significant specific biomolecular information along the cultivation, providing a complete bioprocess analysis, once it detects slight molecular changes which it will be useful for screening and optimization process in the biotechnological or pharmaceutical industry.Elsevier ScienceRCIPLSousa, Pedro N.Calado, Cecília2017-11-10T10:21:03Z2017-102017-10-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.21/7477engSAMPAIO, Pedro N. Sousa; CALADO, Cecília Ribeiro da Cruz - Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy. Journal of Biotechnology. ISSN 0168-1656. Vol. 260 (2017), pp. 1-100168-165610.1016/j.jbiotec.2017.08.020metadata only accessinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-08-03T09:53:35Zoai:repositorio.ipl.pt:10400.21/7477Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:16:25.167446Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy |
title |
Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy |
spellingShingle |
Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy Sousa, Pedro N. FT-MIR spectroscopy High-throughput analysis Principal components analysis Recombinant cyprosin B Screening process |
title_short |
Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy |
title_full |
Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy |
title_fullStr |
Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy |
title_full_unstemmed |
Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy |
title_sort |
Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy |
author |
Sousa, Pedro N. |
author_facet |
Sousa, Pedro N. Calado, Cecília |
author_role |
author |
author2 |
Calado, Cecília |
author2_role |
author |
dc.contributor.none.fl_str_mv |
RCIPL |
dc.contributor.author.fl_str_mv |
Sousa, Pedro N. Calado, Cecília |
dc.subject.por.fl_str_mv |
FT-MIR spectroscopy High-throughput analysis Principal components analysis Recombinant cyprosin B Screening process |
topic |
FT-MIR spectroscopy High-throughput analysis Principal components analysis Recombinant cyprosin B Screening process |
description |
This study shows the application of the Fourier transform mid-infrared spectroscopy (FT-MIR) associated with high-throughput technology to study the biochemical fingerprints of different Saccharomyces cerevisiae strains transformed with the same expression system along the similar cultivation in bioreactor. The phenotype, as well as the cellular metabolism and recombinant cyprosin biosynthesis, were determined. The differences observed were confirmed by conventional cyprosin activity protocol, and the metabolic evolution was analyzed using high-performance liquid chromatography technique. The spectral analysis based on chemometrics tools, such as the principal component analysis, is a useful methodology for the phenotypes characterization as well as the specific metabolic states along the cultivations according to the clusters created. The ratio bands of spectra also represented a useful tool to evaluate the metabolic and biochemical differences between both expression systems, allowing to have an additional parameter to the biomolecular comparison. Therefore, high-throughput FT-MIR spectroscopy associated with multivariate data analysis represent a valuable strategy for extracting significant specific biomolecular information along the cultivation, providing a complete bioprocess analysis, once it detects slight molecular changes which it will be useful for screening and optimization process in the biotechnological or pharmaceutical industry. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-11-10T10:21:03Z 2017-10 2017-10-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.21/7477 |
url |
http://hdl.handle.net/10400.21/7477 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
SAMPAIO, Pedro N. Sousa; CALADO, Cecília Ribeiro da Cruz - Comparative analysis of different transformed Saccharomyces cerevisiae strains based on high- throughput Fourier transform infrared spectroscopy. Journal of Biotechnology. ISSN 0168-1656. Vol. 260 (2017), pp. 1-10 0168-1656 10.1016/j.jbiotec.2017.08.020 |
dc.rights.driver.fl_str_mv |
metadata only access info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
metadata only access |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier Science |
publisher.none.fl_str_mv |
Elsevier Science |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1799133423939354624 |