Detection of alexandrium minutum dinoflagellate in environmental samples using electrochem
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.22/18943 |
Resumo: | Dinoflagellates are aquatic microorganisms that inhabit both salt and fresh waters. These microorganisms are mostly harmless, however, under certain conditions, some species rapidly re produce forming water blooms that not only discolor the waters but also compromise the health of every organism in the vicinity, as some dinoflagellates produce potent toxins deemed unsafe for human health (e.g. Alexandrium minutum). In this work, a disposable electrochemical genosensor for the detection of the toxic dinoflagellate Alexandrium minutum was developed. The analytical plat form methodology consisted in a sandwich format heterogeneous hybridization of complementary DNA sequences assay. The 70 bp A. minutum-specific targeting probe, the 45 bp fluorescein isothi ocyanate-labelled signaling DNA probe and the 25 bp thiolated-DNA-capture probe were designed, after analyzing public databases. To maximize the complementary DNA hybridization and to avoid the formation of strong secondary structures, a mixed mercaptohexanol (MCH) and self-assembled monolayer (SAM) A. minutum-specific DNA-capture probe was immobilized onto disposable screen-printed gold electrodes (SPGE). Using chronoamperometric measurements, the enzymatic amplification of the electrochemical signal was obtained with a concentration range from 0.12 to 1.0 nM, a LD of 24.78 pM with a RSD < 5.2 %. This electrochemical genosensor was successfully applied to the selective analysis of the targeted A. minutum specific region of denatured genomic DNA, ex tracted from toxic dinoflagellates present in the Atlantic Ocean. |
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Detection of alexandrium minutum dinoflagellate in environmental samples using electrochemAlexandrium minutumChronoamperometryElectrochemical genosensorSandwich format hybridizationScreen-printed gold electrodesDinoflagellates are aquatic microorganisms that inhabit both salt and fresh waters. These microorganisms are mostly harmless, however, under certain conditions, some species rapidly re produce forming water blooms that not only discolor the waters but also compromise the health of every organism in the vicinity, as some dinoflagellates produce potent toxins deemed unsafe for human health (e.g. Alexandrium minutum). In this work, a disposable electrochemical genosensor for the detection of the toxic dinoflagellate Alexandrium minutum was developed. The analytical plat form methodology consisted in a sandwich format heterogeneous hybridization of complementary DNA sequences assay. The 70 bp A. minutum-specific targeting probe, the 45 bp fluorescein isothi ocyanate-labelled signaling DNA probe and the 25 bp thiolated-DNA-capture probe were designed, after analyzing public databases. To maximize the complementary DNA hybridization and to avoid the formation of strong secondary structures, a mixed mercaptohexanol (MCH) and self-assembled monolayer (SAM) A. minutum-specific DNA-capture probe was immobilized onto disposable screen-printed gold electrodes (SPGE). Using chronoamperometric measurements, the enzymatic amplification of the electrochemical signal was obtained with a concentration range from 0.12 to 1.0 nM, a LD of 24.78 pM with a RSD < 5.2 %. This electrochemical genosensor was successfully applied to the selective analysis of the targeted A. minutum specific region of denatured genomic DNA, ex tracted from toxic dinoflagellates present in the Atlantic Ocean.MDPIRepositório Científico do Instituto Politécnico do PortoMorais, Stephanie L.Barros, PiedadeSantos, MarleneDelerue-Matos, CristinaGomes, Andreia C.Barroso, M. Fátima2021-11-24T16:38:07Z2021-08-172021-08-17T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.22/18943engMorais, S. L., Barros, P., Santos, M., Delerue-Matos, C., Gomes, A. C., & Barroso, M. F. (2017). Detection of Alexandrium minutum dinoflagellate in environ mental samples using electrochem. Chemistry proceedings.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-03-13T13:12:13Zoai:recipp.ipp.pt:10400.22/18943Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T17:38:59.496435Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Detection of alexandrium minutum dinoflagellate in environmental samples using electrochem |
title |
Detection of alexandrium minutum dinoflagellate in environmental samples using electrochem |
spellingShingle |
Detection of alexandrium minutum dinoflagellate in environmental samples using electrochem Morais, Stephanie L. Alexandrium minutum Chronoamperometry Electrochemical genosensor Sandwich format hybridization Screen-printed gold electrodes |
title_short |
Detection of alexandrium minutum dinoflagellate in environmental samples using electrochem |
title_full |
Detection of alexandrium minutum dinoflagellate in environmental samples using electrochem |
title_fullStr |
Detection of alexandrium minutum dinoflagellate in environmental samples using electrochem |
title_full_unstemmed |
Detection of alexandrium minutum dinoflagellate in environmental samples using electrochem |
title_sort |
Detection of alexandrium minutum dinoflagellate in environmental samples using electrochem |
author |
Morais, Stephanie L. |
author_facet |
Morais, Stephanie L. Barros, Piedade Santos, Marlene Delerue-Matos, Cristina Gomes, Andreia C. Barroso, M. Fátima |
author_role |
author |
author2 |
Barros, Piedade Santos, Marlene Delerue-Matos, Cristina Gomes, Andreia C. Barroso, M. Fátima |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Repositório Científico do Instituto Politécnico do Porto |
dc.contributor.author.fl_str_mv |
Morais, Stephanie L. Barros, Piedade Santos, Marlene Delerue-Matos, Cristina Gomes, Andreia C. Barroso, M. Fátima |
dc.subject.por.fl_str_mv |
Alexandrium minutum Chronoamperometry Electrochemical genosensor Sandwich format hybridization Screen-printed gold electrodes |
topic |
Alexandrium minutum Chronoamperometry Electrochemical genosensor Sandwich format hybridization Screen-printed gold electrodes |
description |
Dinoflagellates are aquatic microorganisms that inhabit both salt and fresh waters. These microorganisms are mostly harmless, however, under certain conditions, some species rapidly re produce forming water blooms that not only discolor the waters but also compromise the health of every organism in the vicinity, as some dinoflagellates produce potent toxins deemed unsafe for human health (e.g. Alexandrium minutum). In this work, a disposable electrochemical genosensor for the detection of the toxic dinoflagellate Alexandrium minutum was developed. The analytical plat form methodology consisted in a sandwich format heterogeneous hybridization of complementary DNA sequences assay. The 70 bp A. minutum-specific targeting probe, the 45 bp fluorescein isothi ocyanate-labelled signaling DNA probe and the 25 bp thiolated-DNA-capture probe were designed, after analyzing public databases. To maximize the complementary DNA hybridization and to avoid the formation of strong secondary structures, a mixed mercaptohexanol (MCH) and self-assembled monolayer (SAM) A. minutum-specific DNA-capture probe was immobilized onto disposable screen-printed gold electrodes (SPGE). Using chronoamperometric measurements, the enzymatic amplification of the electrochemical signal was obtained with a concentration range from 0.12 to 1.0 nM, a LD of 24.78 pM with a RSD < 5.2 %. This electrochemical genosensor was successfully applied to the selective analysis of the targeted A. minutum specific region of denatured genomic DNA, ex tracted from toxic dinoflagellates present in the Atlantic Ocean. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-11-24T16:38:07Z 2021-08-17 2021-08-17T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.22/18943 |
url |
http://hdl.handle.net/10400.22/18943 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Morais, S. L., Barros, P., Santos, M., Delerue-Matos, C., Gomes, A. C., & Barroso, M. F. (2017). Detection of Alexandrium minutum dinoflagellate in environ mental samples using electrochem. Chemistry proceedings. |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
MDPI |
publisher.none.fl_str_mv |
MDPI |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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1799131477972090880 |