Muller's ratchet in random graphs and scale free networks

Detalhes bibliográficos
Autor(a) principal: Campos, P.R.A.
Data de Publicação: 2006
Outros Autores: Combadão, J., Dionísio, F., Gordo, I.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.7/84
Resumo: Muller's ratchet is an evolutionary process that has been implicated in the extinction of asexual species, the evolution of mitochondria, the degeneration of the Y chromosome, the evolution of sex and recombination and the evolution of microbes. Here we study the speed of Muller's ratchet in a population subdivided into many small subpopulations connected by migration, and distributed on a network. We compare the speed of the ratchet in two distinct types of topologies: scale free networks and random graphs. The difference between the topologies is noticeable when the average connectivity of the network and the migration rate is large. In this situation we observe that the ratchet clicks faster in scale free networks than in random graphs. So contrary to intuition, scale free networks are more prone to loss of genetic information than random graphs. On the other hand, we show that scale free networks are more robust to the random extinction than random graphs. Since these complex networks have been shown to describe well real-life systems, our results open a framework for studying the evolution of microbes and disease epidemics.
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spelling Muller's ratchet in random graphs and scale free networksAlgorithmsEvolutionExtinction, BiologicalGenetics, PopulationModels, BiologicalPopulation GrowthReproduction, Asexual/geneticsSpeedAccumulationSpreadMuller's ratchet is an evolutionary process that has been implicated in the extinction of asexual species, the evolution of mitochondria, the degeneration of the Y chromosome, the evolution of sex and recombination and the evolution of microbes. Here we study the speed of Muller's ratchet in a population subdivided into many small subpopulations connected by migration, and distributed on a network. We compare the speed of the ratchet in two distinct types of topologies: scale free networks and random graphs. The difference between the topologies is noticeable when the average connectivity of the network and the migration rate is large. In this situation we observe that the ratchet clicks faster in scale free networks than in random graphs. So contrary to intuition, scale free networks are more prone to loss of genetic information than random graphs. On the other hand, we show that scale free networks are more robust to the random extinction than random graphs. Since these complex networks have been shown to describe well real-life systems, our results open a framework for studying the evolution of microbes and disease epidemics.American Physical SocietyARCACampos, P.R.A.Combadão, J.Dionísio, F.Gordo, I.2010-03-25T12:08:35Z2006-102006-10-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.7/84engCampos PRA, Combadão J , Dionisio F. and I. Gordo (2006) Muller's ratchet in random graphs and scale free networks Phys. Rev. E 74, 0429011539-375510.1103/PhysRevE.74.042901info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:34:38Zoai:arca.igc.gulbenkian.pt:10400.7/84Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:11:34.213699Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Muller's ratchet in random graphs and scale free networks
title Muller's ratchet in random graphs and scale free networks
spellingShingle Muller's ratchet in random graphs and scale free networks
Campos, P.R.A.
Algorithms
Evolution
Extinction, Biological
Genetics, Population
Models, Biological
Population Growth
Reproduction, Asexual/genetics
Speed
Accumulation
Spread
title_short Muller's ratchet in random graphs and scale free networks
title_full Muller's ratchet in random graphs and scale free networks
title_fullStr Muller's ratchet in random graphs and scale free networks
title_full_unstemmed Muller's ratchet in random graphs and scale free networks
title_sort Muller's ratchet in random graphs and scale free networks
author Campos, P.R.A.
author_facet Campos, P.R.A.
Combadão, J.
Dionísio, F.
Gordo, I.
author_role author
author2 Combadão, J.
Dionísio, F.
Gordo, I.
author2_role author
author
author
dc.contributor.none.fl_str_mv ARCA
dc.contributor.author.fl_str_mv Campos, P.R.A.
Combadão, J.
Dionísio, F.
Gordo, I.
dc.subject.por.fl_str_mv Algorithms
Evolution
Extinction, Biological
Genetics, Population
Models, Biological
Population Growth
Reproduction, Asexual/genetics
Speed
Accumulation
Spread
topic Algorithms
Evolution
Extinction, Biological
Genetics, Population
Models, Biological
Population Growth
Reproduction, Asexual/genetics
Speed
Accumulation
Spread
description Muller's ratchet is an evolutionary process that has been implicated in the extinction of asexual species, the evolution of mitochondria, the degeneration of the Y chromosome, the evolution of sex and recombination and the evolution of microbes. Here we study the speed of Muller's ratchet in a population subdivided into many small subpopulations connected by migration, and distributed on a network. We compare the speed of the ratchet in two distinct types of topologies: scale free networks and random graphs. The difference between the topologies is noticeable when the average connectivity of the network and the migration rate is large. In this situation we observe that the ratchet clicks faster in scale free networks than in random graphs. So contrary to intuition, scale free networks are more prone to loss of genetic information than random graphs. On the other hand, we show that scale free networks are more robust to the random extinction than random graphs. Since these complex networks have been shown to describe well real-life systems, our results open a framework for studying the evolution of microbes and disease epidemics.
publishDate 2006
dc.date.none.fl_str_mv 2006-10
2006-10-01T00:00:00Z
2010-03-25T12:08:35Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.7/84
url http://hdl.handle.net/10400.7/84
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Campos PRA, Combadão J , Dionisio F. and I. Gordo (2006) Muller's ratchet in random graphs and scale free networks Phys. Rev. E 74, 042901
1539-3755
10.1103/PhysRevE.74.042901
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv American Physical Society
publisher.none.fl_str_mv American Physical Society
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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