Microsatellite markers: what they mean and why they are so useful

Detalhes bibliográficos
Autor(a) principal: Vieira,Maria Lucia Carneiro
Data de Publicação: 2016
Outros Autores: Santini,Luciane, Diniz,Augusto Lima, Munhoz,Carla de Freitas
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572016000300312
Resumo: Abstract Microsatellites or Single Sequence Repeats (SSRs) are extensively employed in plant genetics studies, using both low and high throughput genotyping approaches. Motivated by the importance of these sequences over the last decades this review aims to address some theoretical aspects of SSRs, including definition, characterization and biological function. The methodologies for the development of SSR loci, genotyping and their applications as molecular markers are also reviewed. Finally, two data surveys are presented. The first was conducted using the main database of Web of Science, prospecting for articles published over the period from 2010 to 2015, resulting in approximately 930 records. The second survey was focused on papers that aimed at SSR marker development, published in the American Journal of Botany's Primer Notes and Protocols in Plant Sciences (over 2013 up to 2015), resulting in a total of 87 publications. This scenario confirms the current relevance of SSRs and indicates their continuous utilization in plant science.
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spelling Microsatellite markers: what they mean and why they are so usefulSSR biological functiongenomic distributiongenotyping approachesmolecular markerpractical utilityAbstract Microsatellites or Single Sequence Repeats (SSRs) are extensively employed in plant genetics studies, using both low and high throughput genotyping approaches. Motivated by the importance of these sequences over the last decades this review aims to address some theoretical aspects of SSRs, including definition, characterization and biological function. The methodologies for the development of SSR loci, genotyping and their applications as molecular markers are also reviewed. Finally, two data surveys are presented. The first was conducted using the main database of Web of Science, prospecting for articles published over the period from 2010 to 2015, resulting in approximately 930 records. The second survey was focused on papers that aimed at SSR marker development, published in the American Journal of Botany's Primer Notes and Protocols in Plant Sciences (over 2013 up to 2015), resulting in a total of 87 publications. This scenario confirms the current relevance of SSRs and indicates their continuous utilization in plant science.Sociedade Brasileira de Genética2016-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572016000300312Genetics and Molecular Biology v.39 n.3 2016reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-GMB-2016-0027info:eu-repo/semantics/openAccessVieira,Maria Lucia CarneiroSantini,LucianeDiniz,Augusto LimaMunhoz,Carla de Freitaseng2016-08-25T00:00:00Zoai:scielo:S1415-47572016000300312Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2016-08-25T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Microsatellite markers: what they mean and why they are so useful
title Microsatellite markers: what they mean and why they are so useful
spellingShingle Microsatellite markers: what they mean and why they are so useful
Vieira,Maria Lucia Carneiro
SSR biological function
genomic distribution
genotyping approaches
molecular marker
practical utility
title_short Microsatellite markers: what they mean and why they are so useful
title_full Microsatellite markers: what they mean and why they are so useful
title_fullStr Microsatellite markers: what they mean and why they are so useful
title_full_unstemmed Microsatellite markers: what they mean and why they are so useful
title_sort Microsatellite markers: what they mean and why they are so useful
author Vieira,Maria Lucia Carneiro
author_facet Vieira,Maria Lucia Carneiro
Santini,Luciane
Diniz,Augusto Lima
Munhoz,Carla de Freitas
author_role author
author2 Santini,Luciane
Diniz,Augusto Lima
Munhoz,Carla de Freitas
author2_role author
author
author
dc.contributor.author.fl_str_mv Vieira,Maria Lucia Carneiro
Santini,Luciane
Diniz,Augusto Lima
Munhoz,Carla de Freitas
dc.subject.por.fl_str_mv SSR biological function
genomic distribution
genotyping approaches
molecular marker
practical utility
topic SSR biological function
genomic distribution
genotyping approaches
molecular marker
practical utility
description Abstract Microsatellites or Single Sequence Repeats (SSRs) are extensively employed in plant genetics studies, using both low and high throughput genotyping approaches. Motivated by the importance of these sequences over the last decades this review aims to address some theoretical aspects of SSRs, including definition, characterization and biological function. The methodologies for the development of SSR loci, genotyping and their applications as molecular markers are also reviewed. Finally, two data surveys are presented. The first was conducted using the main database of Web of Science, prospecting for articles published over the period from 2010 to 2015, resulting in approximately 930 records. The second survey was focused on papers that aimed at SSR marker development, published in the American Journal of Botany's Primer Notes and Protocols in Plant Sciences (over 2013 up to 2015), resulting in a total of 87 publications. This scenario confirms the current relevance of SSRs and indicates their continuous utilization in plant science.
publishDate 2016
dc.date.none.fl_str_mv 2016-09-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572016000300312
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572016000300312
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4685-GMB-2016-0027
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dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.39 n.3 2016
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
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reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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