Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da Universidade Federal do Ceará (UFC) |
Texto Completo: | http://www.repositorio.ufc.br/handle/riufc/18861 |
Resumo: | Chitinases are enzymes capable of hydrolyzing chitin, a polysaccharide composed of units of N-acetyl-D- glucosamine, which is abundant in nature. The genome sequence of C. violaceum ATCC 12472 has revealed some genes encoding proteins with potential applications in agriculture and medicine, such as those encoding chitinases. This study aimed to express the protein CV2736 in Pichia pastoris KM71H and to evaluate its antimicrobial potential against microorganism of medical importance. To this purpose, the full ORF (encoding rCV2736 PS+) and a partial sequence of it, encoding a truncated protein without its putative signal peptide (rCV2736PS‒), were cloned into the vector pPICZ α A for expression in P. pastoris. The protein rCV2736 PS+ was detected in the cell-free culture medium of P. pastoris cells harboring the corre sponding expression cassete. The recombinant CV2736PS+ was produced in a heterogeneous manner, and when analyzed by SDS-PAGE, three protein bands with apparent molecular masses of 41. 3, 38.1 and 36. 2 kDa were detected. The protein band with the highest molecular mass (41.3 kDa) was stained with the Periodic acid - Schiff’s reagent, thus showing that this band corresponds to N-glycosylated rCV2736PS+. Furthermore, tryptic peptides identified by mass spectrometry (ESI-MS) confirmed the identity of the expressed protein. The recombinant protein produced without the first 22 amino acids(rCV2736PS‒) showed higher chitinase activity than that found for th e fraction containing rCV2736PS+, despite not being detected by SDS-PAGE. The recombinant protein CV2736PS+, present in the fraction F0/95 from the culture medium of induced cells, was active after heat treatment at 50 °C and its maximum chitinolytic activity was recorded at pH 3.0. This fraction was also able to degrade the synthetic substrates 4-nitrophenyl N,N'-diacetyl -β-D-chitobioside and 4-nitrophenyl N,N',N''-triacet yl chitotrioside, which characterizes an endochitinase activity. Abinitio molecular modeling demonstrated that the polypeptide of CV2736 likely folds as a(β/α)8 barrel (also known as TIM barrel), which is typical of the GH18 family proteins. The fraction F0/95 showed antimicrobial activity against Pseudomonas aeruginosa, Escherichia coli, Staphylococcus aureus and growth inhibition against Salmonella cholera-suis. The same fraction were evaluated against the yeast Candida albicans, but was not detectable inhibition of this microorganism in the assay. These results suggest that rCV2736 should be further studied as a new anti-bacterial agent. |
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Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacterianoHeterologous expression of a glycoside hydrolase Family 18 (cv2736) of Chromobacterium violaceum in Pichia pastoris with potential antibacterialBioquímicaQuitinasePichia pastorisAntimicrobianoExpressão heterólogaChitinaseAntimicrobialHeterologous expressionPichiaChromobacteriumQuitinasesAntibacterianosChitinases are enzymes capable of hydrolyzing chitin, a polysaccharide composed of units of N-acetyl-D- glucosamine, which is abundant in nature. The genome sequence of C. violaceum ATCC 12472 has revealed some genes encoding proteins with potential applications in agriculture and medicine, such as those encoding chitinases. This study aimed to express the protein CV2736 in Pichia pastoris KM71H and to evaluate its antimicrobial potential against microorganism of medical importance. To this purpose, the full ORF (encoding rCV2736 PS+) and a partial sequence of it, encoding a truncated protein without its putative signal peptide (rCV2736PS‒), were cloned into the vector pPICZ α A for expression in P. pastoris. The protein rCV2736 PS+ was detected in the cell-free culture medium of P. pastoris cells harboring the corre sponding expression cassete. The recombinant CV2736PS+ was produced in a heterogeneous manner, and when analyzed by SDS-PAGE, three protein bands with apparent molecular masses of 41. 3, 38.1 and 36. 2 kDa were detected. The protein band with the highest molecular mass (41.3 kDa) was stained with the Periodic acid - Schiff’s reagent, thus showing that this band corresponds to N-glycosylated rCV2736PS+. Furthermore, tryptic peptides identified by mass spectrometry (ESI-MS) confirmed the identity of the expressed protein. The recombinant protein produced without the first 22 amino acids(rCV2736PS‒) showed higher chitinase activity than that found for th e fraction containing rCV2736PS+, despite not being detected by SDS-PAGE. The recombinant protein CV2736PS+, present in the fraction F0/95 from the culture medium of induced cells, was active after heat treatment at 50 °C and its maximum chitinolytic activity was recorded at pH 3.0. This fraction was also able to degrade the synthetic substrates 4-nitrophenyl N,N'-diacetyl -β-D-chitobioside and 4-nitrophenyl N,N',N''-triacet yl chitotrioside, which characterizes an endochitinase activity. Abinitio molecular modeling demonstrated that the polypeptide of CV2736 likely folds as a(β/α)8 barrel (also known as TIM barrel), which is typical of the GH18 family proteins. The fraction F0/95 showed antimicrobial activity against Pseudomonas aeruginosa, Escherichia coli, Staphylococcus aureus and growth inhibition against Salmonella cholera-suis. The same fraction were evaluated against the yeast Candida albicans, but was not detectable inhibition of this microorganism in the assay. These results suggest that rCV2736 should be further studied as a new anti-bacterial agent.Quitinases são enzimas capazes de hidrolisar quitina, um polissacarídeo formado por unidades de N-acetil-β-D-glucosamina, que é extremamente abundante na natureza. Após o sequenciamento do genoma de C. violaceum ATCC 12472, alguns genes referentes a proteínas com potencial biotecnológico foram encontrados, dentre eles os que codificam para quitinases. Este trabalho teve como objetivos expressar a proteína CV2736 de C. violaceum ATCC 12472 de forma recombinante em células de Pichia pastoris KM71H e avaliar seu potencial antimicrobiano frente a microrganismos de importância médica. Para isto, a sequencia completa da ORF (CV2736PS+), bem como uma sequencia parcial, codificando uma proteína truncada, sem um possível peptídeo sinal N-terminal (CV2736PS‒), foram clonadas no vetor de expressão pPICZαA, para expressão em P. pastoris KM71H. A proteína completa (rCV2736PS+) foi detectada em uma fração proteica, contendo as proteínas secretadas para o meio de cultura, por células de P. pastoris transformadas com o respectivo cassete de expressão recombinante. A rCV2736PS+ apresentou-se de forma heterogênea, quando analisada por SDS-PAGE, exibindo três bandas com massas moleculares aparentes de 41,3, 38,1 e 36,2 kDa, respectivamente, sendo uma delas (41,3 kDa) maior do que se poderia deduzir a partir da sequencia de aminoácidos. Após coloração com reagente de Schiff para revelação de glicoproteínas, constatou-se que essa banda (41,3 kDa) correspondia a rCV2736PS+ na sua forma N-glicosilada. Além disso, rCV2736PS+ teve seus peptídeos identificados por espectrometria de massas, na fração F0/95 do meio de cultura livre de células. A proteína recombinante produzida sem os 22 aminoácidos iniciais (rCV2736PS‒) apresentou atividade quitinásica maior que a encontrada para a fração contendo rCV2736PS+, apesar de não ter sido detectada por SDS-PAGE. A fração F0/95 do meio de cultura contendo rCV2736PS+ mostrou-se termoestável até 50°C e com pico de atividade quitinolítica em pH 3,0. A mesma fração apresentou maior atividade endoquitinásica e ativa contra os substratos sintéticos 4-nitrofenil N,N’–diacetil-β-D-quitobiosídeo e 4-nitrofenil N,N’,N’’–triacetilquitotriose. A modelagem molecular evidenciou o dobramento na forma de barril (β/α)8 (barril TIM), típico das proteínas da família GH18. Do mesmo modo, a fração F0/95 foi testada contra seis espécies de bactérias, apresentando atividade microbicida contra Pseudomona aeruginosa, Escherichia coli e Staphylococcus aureus, e foi capaz de inibir o crescimento de Salmonella choleraesuis. A mesma fração foi testada contra a levedura Candida albicans, mas não foi detectada inibição do crescimento contra este microrganismo no ensaio. Portanto, a proteína recombinante rCV2736 pode, assim, ser considerada uma molécula com potencial antibacteriano. Palavras-chave: Quitinase; Pichia pastoris; antimicrobiano; Expressão heteróloga.Grangeiro, Thalles BarbosaMedeiros, Suelen Carneiro de2016-08-02T20:21:01Z2016-08-02T20:21:01Z2012info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfMEDEIROS, Suelen Carneiro de. Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano. 2012. 122 f. Dissertação (Mestrado em Bioquímica) - Universidade Federal do Ceará, Fortaleza, 2012.http://www.repositorio.ufc.br/handle/riufc/18861porreponame:Repositório Institucional da Universidade Federal do Ceará (UFC)instname:Universidade Federal do Ceará (UFC)instacron:UFCinfo:eu-repo/semantics/openAccess2020-05-25T11:42:48Zoai:repositorio.ufc.br:riufc/18861Repositório InstitucionalPUBhttp://www.repositorio.ufc.br/ri-oai/requestbu@ufc.br || repositorio@ufc.bropendoar:2024-09-11T18:47:14.440708Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)false |
dc.title.none.fl_str_mv |
Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano Heterologous expression of a glycoside hydrolase Family 18 (cv2736) of Chromobacterium violaceum in Pichia pastoris with potential antibacterial |
title |
Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano |
spellingShingle |
Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano Medeiros, Suelen Carneiro de Bioquímica Quitinase Pichia pastoris Antimicrobiano Expressão heteróloga Chitinase Antimicrobial Heterologous expression Pichia Chromobacterium Quitinases Antibacterianos |
title_short |
Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano |
title_full |
Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano |
title_fullStr |
Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano |
title_full_unstemmed |
Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano |
title_sort |
Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano |
author |
Medeiros, Suelen Carneiro de |
author_facet |
Medeiros, Suelen Carneiro de |
author_role |
author |
dc.contributor.none.fl_str_mv |
Grangeiro, Thalles Barbosa |
dc.contributor.author.fl_str_mv |
Medeiros, Suelen Carneiro de |
dc.subject.por.fl_str_mv |
Bioquímica Quitinase Pichia pastoris Antimicrobiano Expressão heteróloga Chitinase Antimicrobial Heterologous expression Pichia Chromobacterium Quitinases Antibacterianos |
topic |
Bioquímica Quitinase Pichia pastoris Antimicrobiano Expressão heteróloga Chitinase Antimicrobial Heterologous expression Pichia Chromobacterium Quitinases Antibacterianos |
description |
Chitinases are enzymes capable of hydrolyzing chitin, a polysaccharide composed of units of N-acetyl-D- glucosamine, which is abundant in nature. The genome sequence of C. violaceum ATCC 12472 has revealed some genes encoding proteins with potential applications in agriculture and medicine, such as those encoding chitinases. This study aimed to express the protein CV2736 in Pichia pastoris KM71H and to evaluate its antimicrobial potential against microorganism of medical importance. To this purpose, the full ORF (encoding rCV2736 PS+) and a partial sequence of it, encoding a truncated protein without its putative signal peptide (rCV2736PS‒), were cloned into the vector pPICZ α A for expression in P. pastoris. The protein rCV2736 PS+ was detected in the cell-free culture medium of P. pastoris cells harboring the corre sponding expression cassete. The recombinant CV2736PS+ was produced in a heterogeneous manner, and when analyzed by SDS-PAGE, three protein bands with apparent molecular masses of 41. 3, 38.1 and 36. 2 kDa were detected. The protein band with the highest molecular mass (41.3 kDa) was stained with the Periodic acid - Schiff’s reagent, thus showing that this band corresponds to N-glycosylated rCV2736PS+. Furthermore, tryptic peptides identified by mass spectrometry (ESI-MS) confirmed the identity of the expressed protein. The recombinant protein produced without the first 22 amino acids(rCV2736PS‒) showed higher chitinase activity than that found for th e fraction containing rCV2736PS+, despite not being detected by SDS-PAGE. The recombinant protein CV2736PS+, present in the fraction F0/95 from the culture medium of induced cells, was active after heat treatment at 50 °C and its maximum chitinolytic activity was recorded at pH 3.0. This fraction was also able to degrade the synthetic substrates 4-nitrophenyl N,N'-diacetyl -β-D-chitobioside and 4-nitrophenyl N,N',N''-triacet yl chitotrioside, which characterizes an endochitinase activity. Abinitio molecular modeling demonstrated that the polypeptide of CV2736 likely folds as a(β/α)8 barrel (also known as TIM barrel), which is typical of the GH18 family proteins. The fraction F0/95 showed antimicrobial activity against Pseudomonas aeruginosa, Escherichia coli, Staphylococcus aureus and growth inhibition against Salmonella cholera-suis. The same fraction were evaluated against the yeast Candida albicans, but was not detectable inhibition of this microorganism in the assay. These results suggest that rCV2736 should be further studied as a new anti-bacterial agent. |
publishDate |
2012 |
dc.date.none.fl_str_mv |
2012 2016-08-02T20:21:01Z 2016-08-02T20:21:01Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
MEDEIROS, Suelen Carneiro de. Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano. 2012. 122 f. Dissertação (Mestrado em Bioquímica) - Universidade Federal do Ceará, Fortaleza, 2012. http://www.repositorio.ufc.br/handle/riufc/18861 |
identifier_str_mv |
MEDEIROS, Suelen Carneiro de. Expressão heteróloga de uma glicosil hidrolase da Família 18 (cv2736) de Chromobacterium violaceum em Pichia pastoris com potencial antibacteriano. 2012. 122 f. Dissertação (Mestrado em Bioquímica) - Universidade Federal do Ceará, Fortaleza, 2012. |
url |
http://www.repositorio.ufc.br/handle/riufc/18861 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
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openAccess |
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application/pdf |
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reponame:Repositório Institucional da Universidade Federal do Ceará (UFC) instname:Universidade Federal do Ceará (UFC) instacron:UFC |
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Universidade Federal do Ceará (UFC) |
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UFC |
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UFC |
reponame_str |
Repositório Institucional da Universidade Federal do Ceará (UFC) |
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Repositório Institucional da Universidade Federal do Ceará (UFC) |
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Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC) |
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