A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras

Detalhes bibliográficos
Autor(a) principal: Jardim, Tatianne Piza Ferrari Abreu
Data de Publicação: 2018
Tipo de documento: Tese
Idioma: por
Título da fonte: Repositório Institucional da UFG
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tede/9067
Resumo: Geological events of the Neogene and the climatic fluctuations of the Quaternary played an important role in shaping the landscape and climate of South America therefore directly influencing the evolutionary history of the organisms of this area over the last million years. These changes led to the alternation between warm and humid, cold and dry periods. Such alternation dictated the dynamics of retraction and expansion of open and forest landscapes. Species associated to these environments evolved following this dynamic, which lead to alteration in genetic conformation, lineage differentiation and even speciation. As in the past, future changes inclimate can modify the landscape causing changes in the geographical distribution of species. In addition, predicted global warming may lead to a decline in genetic diversity as well as lead to extinction due to species' low ability to adapt to drastic and quick changes. In this thesis two regions of mitochondrial DNA (Cytb and 12S) and one nuclear (RAG-1) were used together with coalescing simulations, and ecological niche modelling to access the evolutionary history of a Scinax squalirostris (Lutz, 1925), a species associated to the South American grasslands. In the first chapter, we sought to understand how Neogene and Quaternary geological or climatic events, respectively, may have shaped the current disjunct distribution and the genetic diversity pattern of S. squalirostris. The populations of S. squalirostris were found to have high genetic diversity, with no sign of current gene flow, a high genetic differentiation, and a stable demographic history over time with scattered origin in southern Brazil. Coalescence events date from Pliocene-Pleistocene, with haplotype sharing among geographically distant populations, which indicates incomplete lineage sorting. The paleodistribution models suggests that S. squalirostris lineages were widely distributed during the last glacial maximum (LGM) but afterwards contracting and changing their area of occurrence. These results indicate that the current geographic distribution and genetic diversity of S. squalirostris is due to the contraction of an area widely distributed in the past, generated by the dynamics of retraction of grasslands in warmer periods due to the loss of areas suitable for their occurrence. In the second chapter, we tested the hypothesis that the current populations of S. squalirostris could represent distinct lineages with candidate species not previously described, due to the current disjunct distribution. Using molecular and morphometric data the formation of two groups was rescued. One of them consists in a candidate species to be described, which is a lineage restricted to the Central-West region of Brazil. The other one comprises of populations from the South and Southeast Brazil, Paraguay, Uruguay and Argentina. In the third chapter, ecological niche modelling, molecular techniques and simulations of genetic groups were used to verify how future climate changes could alter the genetic diversity and distribution of S. squalirostris. Through two climatic scenarios with different temperature changes to 2100 (scenario 4.5 RCP increases 1.8 ° C and stabilizes, and scenario 8.5 increases 3.7 ° C and continues to increase), ecological niche modelling analysis indicated a decrease of suitable areas in the Central-West and Southeast regions, with a displacement towards the South of Brazil entering the central region of Argentina towards more anthropized areas. Most of the Central West and Northern Southeast populations may be extinct due to the absence of climatic suitable areas for their occurrence and low genetic diversity. In addition, it was observed that Protections Areas (PAs) currently harbors a large part of the genetic diversity of S. squalirostris. Thus, PAs in areas that will be ideal for the occurrence of S. squalirostris will be able to maintain their high levels of genetic diversity, but with losses of genetic diversity in the Midwest and Southeast regions. This work indicates that future climate changes will negatively affect this species, since the appropriate areas for its occurrence will be reduced and displaced. The loss and changes in genetic clusters may lead to a possible loss of the evolutionary potential of S. squalirostris populations in responding to future climate changes, which could result in the extinction of some populations.
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spelling Collevatti, Rosane Garciahttp://lattes.cnpq.br/9979596352166630Maciel, Natan Medeiroshttp://lattes.cnpq.br/2116561844584292Maciel, Natan MedeirosSilva, Daniela de Melo eLima, Natácia Evangelista deLima, Luciana Signorelli FariaMachado, Iberê Farinahttp://lattes.cnpq.br/6207502743002844Jardim, Tatianne Piza Ferrari Abreu2018-11-14T12:59:52Z2018-10-31ABREU, T. P. F. A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras. 2018. 236 f. Tese (Doutorado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2018.http://repositorio.bc.ufg.br/tede/handle/tede/9067ark:/38995/0013000004snhGeological events of the Neogene and the climatic fluctuations of the Quaternary played an important role in shaping the landscape and climate of South America therefore directly influencing the evolutionary history of the organisms of this area over the last million years. These changes led to the alternation between warm and humid, cold and dry periods. Such alternation dictated the dynamics of retraction and expansion of open and forest landscapes. Species associated to these environments evolved following this dynamic, which lead to alteration in genetic conformation, lineage differentiation and even speciation. As in the past, future changes inclimate can modify the landscape causing changes in the geographical distribution of species. In addition, predicted global warming may lead to a decline in genetic diversity as well as lead to extinction due to species' low ability to adapt to drastic and quick changes. In this thesis two regions of mitochondrial DNA (Cytb and 12S) and one nuclear (RAG-1) were used together with coalescing simulations, and ecological niche modelling to access the evolutionary history of a Scinax squalirostris (Lutz, 1925), a species associated to the South American grasslands. In the first chapter, we sought to understand how Neogene and Quaternary geological or climatic events, respectively, may have shaped the current disjunct distribution and the genetic diversity pattern of S. squalirostris. The populations of S. squalirostris were found to have high genetic diversity, with no sign of current gene flow, a high genetic differentiation, and a stable demographic history over time with scattered origin in southern Brazil. Coalescence events date from Pliocene-Pleistocene, with haplotype sharing among geographically distant populations, which indicates incomplete lineage sorting. The paleodistribution models suggests that S. squalirostris lineages were widely distributed during the last glacial maximum (LGM) but afterwards contracting and changing their area of occurrence. These results indicate that the current geographic distribution and genetic diversity of S. squalirostris is due to the contraction of an area widely distributed in the past, generated by the dynamics of retraction of grasslands in warmer periods due to the loss of areas suitable for their occurrence. In the second chapter, we tested the hypothesis that the current populations of S. squalirostris could represent distinct lineages with candidate species not previously described, due to the current disjunct distribution. Using molecular and morphometric data the formation of two groups was rescued. One of them consists in a candidate species to be described, which is a lineage restricted to the Central-West region of Brazil. The other one comprises of populations from the South and Southeast Brazil, Paraguay, Uruguay and Argentina. In the third chapter, ecological niche modelling, molecular techniques and simulations of genetic groups were used to verify how future climate changes could alter the genetic diversity and distribution of S. squalirostris. Through two climatic scenarios with different temperature changes to 2100 (scenario 4.5 RCP increases 1.8 ° C and stabilizes, and scenario 8.5 increases 3.7 ° C and continues to increase), ecological niche modelling analysis indicated a decrease of suitable areas in the Central-West and Southeast regions, with a displacement towards the South of Brazil entering the central region of Argentina towards more anthropized areas. Most of the Central West and Northern Southeast populations may be extinct due to the absence of climatic suitable areas for their occurrence and low genetic diversity. In addition, it was observed that Protections Areas (PAs) currently harbors a large part of the genetic diversity of S. squalirostris. Thus, PAs in areas that will be ideal for the occurrence of S. squalirostris will be able to maintain their high levels of genetic diversity, but with losses of genetic diversity in the Midwest and Southeast regions. This work indicates that future climate changes will negatively affect this species, since the appropriate areas for its occurrence will be reduced and displaced. The loss and changes in genetic clusters may lead to a possible loss of the evolutionary potential of S. squalirostris populations in responding to future climate changes, which could result in the extinction of some populations.Diferentes eventos, como geológicos do Neógeno e climáticos do Quaternário, tiveram um papel importante com alterações da paisagem e do clima na América do Sul, influenciando diretamente a história evolutiva dos organismos da região nos últimos milhões de anos. Essas mudanças levaram à alternância entre períodos quentes e úmidos com frios e secos, e essa alternância iniciou a dinâmica de retração e expansão de paisagens abertas e florestais. Espécies associadas a essesambientes evoluíram seguindo essa dinâmica, levando a alteração na conformação genética, diferenciação de linhagens e até a especiação. Assim como no passado, mudanças climáticas futuras podem alterar a paisagem causando mudanças na distribuição geográfica das espécies. Além disso, o aquecimento global previsto pode levar a diminuição da diversidade genética e ocasionar a extinção devido à baixa capacidade das espécies de se adaptarem as mudanças drásticas tão rapidamente. Nesta tese utilizou-se duas regiões do DNA mitocondrial (Cytb e 12S) e uma nuclear (RAG-1) juntamente com simulações coalescentes, e de Modelagem de Nicho Ecológico para acessar a história evolutiva de uma espécie de perereca Scinax squalirostris (Lutz, 1925) associada aos Campos (grasslands) Sul-Americanos. No primeiro capítulo buscou-se entender como eventos geológicos do Neógeno e climáticos do Quaternário podem ter moldado a atual distribuição disjunta e o padrão de diversidade genética de S. squalirostris. Encontrou-se que as populações de S. squalirostris possuem alta diversidade genética, com nenhum sinal de fluxo gênico atual, uma alta diferenciação genética e história demográfica estável ao longo do tempo com origem de dispersão no Sul do Brasil. Eventos de coalescência dataram do Plioceno- Pleistoceno, com compartilhamento de haplótipos entre as populações geograficamente distantes, indicando um arranjo incompleto de linhagens. A modelagem de paleodistribuição sugere que as linhagens de S. squalirostris tinham uma ocorrência de ampla distribuição no último máximo glacial (LGM) com contração e mudança de área no período pós-LGM. Tais resultados indicam que a atual distribuição geográfica e diversidade genética de S. squalirostris é devido a contração de uma área amplamente distribuída no passado, gerada pela dinâmica de retração de grasslands nos períodos mais quentes devido à perda de áreas adequadas para sua ocorrência. No segundo capítulo testou-se a hipótese de que as populações atuais de S. squalirostris poderiam representar linhagens distintas, com potencial (is) espécie(s) candidata(s) não descrita(s), devido a atual distribuição disjunta. Com a utilização de dados moleculares e dados morfométricos resgatou-se a formação de dois grupos, sendo um destes com uma espécie a ser descrita, um grupo restrito a região Centro-Oeste do Brasil, e outro grupo abrangendo populações do Sul e Sudeste do Brasil, Paraguai, Uruguai e Argentina. No terceiro capítulo utilizou-se a modelagem de nicho ecológico, juntamente com as análises moleculares e as simulações de agrupamentos genéticos para verificar o quanto as mudanças climáticas futuras poderão alterar a diversidade genética e a distribuição de S. squalirostris. Através de dois cenários climáticos com diferentes alterações na temperatura para 2100 (cenário 4.5 RCP aumenta 1.8oC e estabiliza, e o cenário 8.5 aumenta 3.7°C e continua aumentando), a análise de modelagem de nicho indicou uma diminuição de áreas adequadas na região Centro-Oeste e Sudeste, com um deslocamento em direção ao Sul do Brasil adentrando até a região central da Argentina em direção a áreas mais antropizadas. A maioria das populações do Centro-Oeste e norte da região Sudeste poderão ser extintas devido à ausência de áreas climáticas adequadas para a sua ocorrência e sua baixa diversidade genética. Além disso, foi observado que as Unidades de Conservação (UCs) detêm, atualmente, grande parte da diversidade genética de S. squalirostris. Com as mudanças climáticas previstas, as UCs em áreas que serão ideais para a ocorrência de S. squalirostris conseguirão manter altos níveis de diversidade genética, porém com perdas de diversidade na região Centro-Oeste e Sudeste. Este trabalho indica que as mudanças climáticas futuras afetarão negativamente essa espécie, pois as áreas adequadas para sua ocorrência serão reduzidas e deslocadas. A perda e as alterações nos agrupamentos genéticos, podem levar a uma possível perda do potencial evolutivo das populações de S. squalirostris em responder às mudanças climáticas futuras, o que poderia resultar na extinção de algumas populações.Submitted by Luciana Ferreira (lucgeral@gmail.com) on 2018-11-14T11:45:49Z No. of bitstreams: 2 Tese - Tatianne Piza Ferrari Abreu Jardim - 2018.pdf: 6203462 bytes, checksum: da8fd40f0daa85798ef8b9933080b8f5 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2018-11-14T12:59:52Z (GMT) No. of bitstreams: 2 Tese - Tatianne Piza Ferrari Abreu Jardim - 2018.pdf: 6203462 bytes, checksum: da8fd40f0daa85798ef8b9933080b8f5 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Made available in DSpace on 2018-11-14T12:59:52Z (GMT). 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dc.title.eng.fl_str_mv A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras
dc.title.alternative.eng.fl_str_mv The evolutionary history of a South American treefrog Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): a rescue of the past and future consequences
title A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras
spellingShingle A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras
Jardim, Tatianne Piza Ferrari Abreu
Conservação
Delimitação
Diversidade genética
Simulação coalescente
Filogeografia
Mudança climática
Coalescent simulations
Conservation
Climate change
Delimitation
Genetic diversity
Phylogeography
GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
title_short A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras
title_full A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras
title_fullStr A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras
title_full_unstemmed A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras
title_sort A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras
author Jardim, Tatianne Piza Ferrari Abreu
author_facet Jardim, Tatianne Piza Ferrari Abreu
author_role author
dc.contributor.advisor1.fl_str_mv Collevatti, Rosane Garcia
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/9979596352166630
dc.contributor.advisor-co1.fl_str_mv Maciel, Natan Medeiros
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/2116561844584292
dc.contributor.referee1.fl_str_mv Maciel, Natan Medeiros
dc.contributor.referee2.fl_str_mv Silva, Daniela de Melo e
dc.contributor.referee3.fl_str_mv Lima, Natácia Evangelista de
dc.contributor.referee4.fl_str_mv Lima, Luciana Signorelli Faria
dc.contributor.referee5.fl_str_mv Machado, Iberê Farina
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/6207502743002844
dc.contributor.author.fl_str_mv Jardim, Tatianne Piza Ferrari Abreu
contributor_str_mv Collevatti, Rosane Garcia
Maciel, Natan Medeiros
Maciel, Natan Medeiros
Silva, Daniela de Melo e
Lima, Natácia Evangelista de
Lima, Luciana Signorelli Faria
Machado, Iberê Farina
dc.subject.por.fl_str_mv Conservação
Delimitação
Diversidade genética
Simulação coalescente
Filogeografia
Mudança climática
topic Conservação
Delimitação
Diversidade genética
Simulação coalescente
Filogeografia
Mudança climática
Coalescent simulations
Conservation
Climate change
Delimitation
Genetic diversity
Phylogeography
GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
dc.subject.eng.fl_str_mv Coalescent simulations
Conservation
Climate change
Delimitation
Genetic diversity
Phylogeography
dc.subject.cnpq.fl_str_mv GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
description Geological events of the Neogene and the climatic fluctuations of the Quaternary played an important role in shaping the landscape and climate of South America therefore directly influencing the evolutionary history of the organisms of this area over the last million years. These changes led to the alternation between warm and humid, cold and dry periods. Such alternation dictated the dynamics of retraction and expansion of open and forest landscapes. Species associated to these environments evolved following this dynamic, which lead to alteration in genetic conformation, lineage differentiation and even speciation. As in the past, future changes inclimate can modify the landscape causing changes in the geographical distribution of species. In addition, predicted global warming may lead to a decline in genetic diversity as well as lead to extinction due to species' low ability to adapt to drastic and quick changes. In this thesis two regions of mitochondrial DNA (Cytb and 12S) and one nuclear (RAG-1) were used together with coalescing simulations, and ecological niche modelling to access the evolutionary history of a Scinax squalirostris (Lutz, 1925), a species associated to the South American grasslands. In the first chapter, we sought to understand how Neogene and Quaternary geological or climatic events, respectively, may have shaped the current disjunct distribution and the genetic diversity pattern of S. squalirostris. The populations of S. squalirostris were found to have high genetic diversity, with no sign of current gene flow, a high genetic differentiation, and a stable demographic history over time with scattered origin in southern Brazil. Coalescence events date from Pliocene-Pleistocene, with haplotype sharing among geographically distant populations, which indicates incomplete lineage sorting. The paleodistribution models suggests that S. squalirostris lineages were widely distributed during the last glacial maximum (LGM) but afterwards contracting and changing their area of occurrence. These results indicate that the current geographic distribution and genetic diversity of S. squalirostris is due to the contraction of an area widely distributed in the past, generated by the dynamics of retraction of grasslands in warmer periods due to the loss of areas suitable for their occurrence. In the second chapter, we tested the hypothesis that the current populations of S. squalirostris could represent distinct lineages with candidate species not previously described, due to the current disjunct distribution. Using molecular and morphometric data the formation of two groups was rescued. One of them consists in a candidate species to be described, which is a lineage restricted to the Central-West region of Brazil. The other one comprises of populations from the South and Southeast Brazil, Paraguay, Uruguay and Argentina. In the third chapter, ecological niche modelling, molecular techniques and simulations of genetic groups were used to verify how future climate changes could alter the genetic diversity and distribution of S. squalirostris. Through two climatic scenarios with different temperature changes to 2100 (scenario 4.5 RCP increases 1.8 ° C and stabilizes, and scenario 8.5 increases 3.7 ° C and continues to increase), ecological niche modelling analysis indicated a decrease of suitable areas in the Central-West and Southeast regions, with a displacement towards the South of Brazil entering the central region of Argentina towards more anthropized areas. Most of the Central West and Northern Southeast populations may be extinct due to the absence of climatic suitable areas for their occurrence and low genetic diversity. In addition, it was observed that Protections Areas (PAs) currently harbors a large part of the genetic diversity of S. squalirostris. Thus, PAs in areas that will be ideal for the occurrence of S. squalirostris will be able to maintain their high levels of genetic diversity, but with losses of genetic diversity in the Midwest and Southeast regions. This work indicates that future climate changes will negatively affect this species, since the appropriate areas for its occurrence will be reduced and displaced. The loss and changes in genetic clusters may lead to a possible loss of the evolutionary potential of S. squalirostris populations in responding to future climate changes, which could result in the extinction of some populations.
publishDate 2018
dc.date.accessioned.fl_str_mv 2018-11-14T12:59:52Z
dc.date.issued.fl_str_mv 2018-10-31
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv ABREU, T. P. F. A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras. 2018. 236 f. Tese (Doutorado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2018.
dc.identifier.uri.fl_str_mv http://repositorio.bc.ufg.br/tede/handle/tede/9067
dc.identifier.dark.fl_str_mv ark:/38995/0013000004snh
identifier_str_mv ABREU, T. P. F. A história evolutiva de uma perereca Sul-Americana Scinax squalirostris (Lutz, 1925) (Anura, Hylidae): um resgate do passado e consequências futuras. 2018. 236 f. Tese (Doutorado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2018.
ark:/38995/0013000004snh
url http://repositorio.bc.ufg.br/tede/handle/tede/9067
dc.language.iso.fl_str_mv por
language por
dc.relation.program.fl_str_mv -3983316729959641468
dc.relation.confidence.fl_str_mv 600
600
600
600
dc.relation.department.fl_str_mv -3872772117827373404
dc.relation.cnpq.fl_str_mv -768308251561457537
dc.relation.sponsorship.fl_str_mv -961409807440757778
dc.rights.driver.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-nd/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Goiás
dc.publisher.program.fl_str_mv Programa de Pós-graduação em Genética e Biologia Molecular (ICB)
dc.publisher.initials.fl_str_mv UFG
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Instituto de Ciências Biológicas - ICB (RG)
publisher.none.fl_str_mv Universidade Federal de Goiás
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