Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts

Detalhes bibliográficos
Autor(a) principal: Dias, Vanessa Duarte
Data de Publicação: 2019
Outros Autores: Carrer Filho, Renato, Cunha, Marcos Gomes da
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Pesquisa Agropecuária Tropical (Online)
Texto Completo: https://revistas.ufg.br/pat/article/view/55132
Resumo: The thermotherapy of sugarcane setts is currently the primary management method for Leifsonia xyli subsp. xyli (Lxx), in Brazil. When they are immersed, the enzymes and proteins of the bacterial cell are denatured without harming the setts buds. Due to possible escapes from detection and consequent bacterium survival to thermotherapy, what may result in asymptomatic seedlings, this study aimed to detect the Leifsonia xyli subsp. xyli bacterium in sugarcane setts using molecular techniques and different time and temperature combinations, with or without the addition of antibiotics. The conventional PCR method detected the Lxx bacterial DNA only in the positive control, consisting of a highly susceptible plant with a high bacterial concentration. Using the nested-PCR, the Lxx DNA was detected in all the treatments used. Thus, none of the treatments adopted in the thermotherapy was able to eliminate the Lxx from the setts, and the use of kasugamicin also did not eliminate the bacterium, but reduced the bacterial population in the tested treatments. These results confirm that the nested-PCR is a useful tool to detect the presence of this phytobacterium in setts that will be used as seedlings. KEYWORDS: Heat treatment, ratoon stunting disease, polimerase chain reaction.
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spelling Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane settsComparação de detecção molecular de Leifsonia xyli subsp. xyli em toletes de cana-de-açúcar tratados termicamentecontrolratoon stunting diseasenested PCRThe thermotherapy of sugarcane setts is currently the primary management method for Leifsonia xyli subsp. xyli (Lxx), in Brazil. When they are immersed, the enzymes and proteins of the bacterial cell are denatured without harming the setts buds. Due to possible escapes from detection and consequent bacterium survival to thermotherapy, what may result in asymptomatic seedlings, this study aimed to detect the Leifsonia xyli subsp. xyli bacterium in sugarcane setts using molecular techniques and different time and temperature combinations, with or without the addition of antibiotics. The conventional PCR method detected the Lxx bacterial DNA only in the positive control, consisting of a highly susceptible plant with a high bacterial concentration. Using the nested-PCR, the Lxx DNA was detected in all the treatments used. Thus, none of the treatments adopted in the thermotherapy was able to eliminate the Lxx from the setts, and the use of kasugamicin also did not eliminate the bacterium, but reduced the bacterial population in the tested treatments. These results confirm that the nested-PCR is a useful tool to detect the presence of this phytobacterium in setts that will be used as seedlings. KEYWORDS: Heat treatment, ratoon stunting disease, polimerase chain reaction.O tratamento térmico de toletes para a formação de mudas de cana-de-açúcar é a principal forma de manejo de Leifsonia xyli subsp. xyli (Lxx), atualmente, no Brasil. Quando imersos, as enzimas e proteínas da célula bacteriana são desnaturadas, sem causar prejuízos às gemas dos toletes. Devido a possíveis escapes à detecção e consequente sobrevivência da bactéria à termoterapia, o que pode dar origem a mudas assintomáticas, objetivou-se realizar a detecção da bactéria Leifsonia xyli subsp. xyli em toletes de cana-de-açúcar, utilizando-se técnicas moleculares e combinações de tempo e temperatura, com ou sem a adição de antibióticos. A técnica PCR convencional detectou o DNA bacteriano de Lxx somente no controle positivo, constituído de planta altamente suscetível, com alta concentração bacteriana. Já pela nested-PCR, o DNA de Lxx foi detectado em todos os tratamentos utilizados. Assim, nenhum dos tratamentos adotados na termoterapia foi capaz de eliminar a Lxx dos toletes, bem como o uso de kasugamicina também não propiciou a eliminação da bactéria, mas reduziu sua população nos tratamentos testados. Estes resultados atestam a nested-PCR como ferramenta útil para a comprovação da presença da fitobactéria em toletes que serão utilizados como mudas. PALAVRAS-CHAVE: Termoterapia, raquitismo-das-soqueiras, reação em cadeia da polimerase.Escola de Agronomia - Universidade Federal de Goiás2019-07-15info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionAvaliado por paresapplication/pdfhttps://revistas.ufg.br/pat/article/view/55132Pesquisa Agropecuária Tropical [Agricultural Research in the Tropics]; Vol. 49 (2019); e55132Pesquisa Agropecuária Tropical (Agricultural Research in the Tropics); Vol. 49 (2019); e55132Pesquisa Agropecuária Tropical; v. 49 (2019); e551321983-4063reponame:Pesquisa Agropecuária Tropical (Online)instname:Universidade Federal de Goiás (UFG)instacron:UFGenghttps://revistas.ufg.br/pat/article/view/55132/33350Dias, Vanessa DuarteCarrer Filho, RenatoCunha, Marcos Gomes dainfo:eu-repo/semantics/openAccess2020-03-02T15:02:12Zoai:ojs.revistas.ufg.br:article/55132Revistahttps://revistas.ufg.br/patPUBhttps://revistas.ufg.br/pat/oaiaseleguini.pat@gmail.com||mgoes@agro.ufg.br1983-40631517-6398opendoar:2024-05-21T19:56:24.813833Pesquisa Agropecuária Tropical (Online) - Universidade Federal de Goiás (UFG)true
dc.title.none.fl_str_mv Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
Comparação de detecção molecular de Leifsonia xyli subsp. xyli em toletes de cana-de-açúcar tratados termicamente
title Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
spellingShingle Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
Dias, Vanessa Duarte
control
ratoon stunting disease
nested PCR
title_short Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
title_full Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
title_fullStr Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
title_full_unstemmed Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
title_sort Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
author Dias, Vanessa Duarte
author_facet Dias, Vanessa Duarte
Carrer Filho, Renato
Cunha, Marcos Gomes da
author_role author
author2 Carrer Filho, Renato
Cunha, Marcos Gomes da
author2_role author
author
dc.contributor.author.fl_str_mv Dias, Vanessa Duarte
Carrer Filho, Renato
Cunha, Marcos Gomes da
dc.subject.por.fl_str_mv control
ratoon stunting disease
nested PCR
topic control
ratoon stunting disease
nested PCR
description The thermotherapy of sugarcane setts is currently the primary management method for Leifsonia xyli subsp. xyli (Lxx), in Brazil. When they are immersed, the enzymes and proteins of the bacterial cell are denatured without harming the setts buds. Due to possible escapes from detection and consequent bacterium survival to thermotherapy, what may result in asymptomatic seedlings, this study aimed to detect the Leifsonia xyli subsp. xyli bacterium in sugarcane setts using molecular techniques and different time and temperature combinations, with or without the addition of antibiotics. The conventional PCR method detected the Lxx bacterial DNA only in the positive control, consisting of a highly susceptible plant with a high bacterial concentration. Using the nested-PCR, the Lxx DNA was detected in all the treatments used. Thus, none of the treatments adopted in the thermotherapy was able to eliminate the Lxx from the setts, and the use of kasugamicin also did not eliminate the bacterium, but reduced the bacterial population in the tested treatments. These results confirm that the nested-PCR is a useful tool to detect the presence of this phytobacterium in setts that will be used as seedlings. KEYWORDS: Heat treatment, ratoon stunting disease, polimerase chain reaction.
publishDate 2019
dc.date.none.fl_str_mv 2019-07-15
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
Avaliado por pares
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://revistas.ufg.br/pat/article/view/55132
url https://revistas.ufg.br/pat/article/view/55132
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://revistas.ufg.br/pat/article/view/55132/33350
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Escola de Agronomia - Universidade Federal de Goiás
publisher.none.fl_str_mv Escola de Agronomia - Universidade Federal de Goiás
dc.source.none.fl_str_mv Pesquisa Agropecuária Tropical [Agricultural Research in the Tropics]; Vol. 49 (2019); e55132
Pesquisa Agropecuária Tropical (Agricultural Research in the Tropics); Vol. 49 (2019); e55132
Pesquisa Agropecuária Tropical; v. 49 (2019); e55132
1983-4063
reponame:Pesquisa Agropecuária Tropical (Online)
instname:Universidade Federal de Goiás (UFG)
instacron:UFG
instname_str Universidade Federal de Goiás (UFG)
instacron_str UFG
institution UFG
reponame_str Pesquisa Agropecuária Tropical (Online)
collection Pesquisa Agropecuária Tropical (Online)
repository.name.fl_str_mv Pesquisa Agropecuária Tropical (Online) - Universidade Federal de Goiás (UFG)
repository.mail.fl_str_mv aseleguini.pat@gmail.com||mgoes@agro.ufg.br
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