Differential gene expression in sugar cane infected by leifsonia xyli subsp. Xyli

Detalhes bibliográficos
Autor(a) principal: Tiraboschi Ferro, Maria Inês [UNESP]
Data de Publicação: 2007
Outros Autores: De Barros, Neli Martins [UNESP], Dabbas, Karina Maria [UNESP], De Laia, Marcelo Luiz [UNESP], Kupper, Katia Cristina [UNESP], De Moraes, Vicente Alberto, De Oliveira, Julio Cezar Franco [UNESP], Ferro, Jesus Aparecido [UNESP], Zingaretti, Sonia Maria [UNESP]
Tipo de documento: Artigo
Idioma: por
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://hdl.handle.net/11449/231854
Resumo: The macroarray nylon membrane technology was used to study the differential gene expression of 3.575 ESTs clones from sugarcane libraries. Total RNA was extracted from two varieties, one known as tolerant (SP80-0185) and another known as susceptible (SP70-3370) to the ratoon stunting disease (RSD), after being inoculated with Lefsonia xyli subsp. xyli bacterial extracts, and used as probe. Out of the 3.575 ESTs, 49 showed differential expression levels. Most of the selected ESTs were found in the resistant variety, 41 being induced and 3 being repressed in response to bacterial inoculation. On the other hand, the susceptible variety showed only 5 differentially expressed genes, 2 being induced and 3 being repressed. These results indicate that the tolerance to bacterial infection could be associated to extracellular signal perception because ESTs associated to signal transduction pathways were induced in the variety SP80-185, e.g. plasma membrane H+ ATPase EST. Also, ESTs related to transcription factor expression, such as G-box, OsNAC6, “DNA binding”, MYB family, Zinc Finger were induced in the tolerant variety after infection. An EST with high similarity to G-Box binding factor, a cis-DNA sequence present in some plant promoter genes required to signal transduction for environmental signals, was also induced. Even though the susceptible variety had no significant difference in gene expression, a lipase-like EST was repressed when plants were infected. Lipase, a membrane enzyme, is also involved in jasmonate biosynthesis, which plays a major role in plant defense mechanisms. Putative roles for induced and repressed genes in both tolerant and susceptible varieties are discussed here.
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spelling Differential gene expression in sugar cane infected by leifsonia xyli subsp. XyliAnálise do perfil de expressão dos genes da cana-de-açúcar envolvidos na interação com Leifsonia xyli subsp. XyliCDNA macroarrayPlant-pathogen interactionRatoon stunting diseaseSugarcaneThe macroarray nylon membrane technology was used to study the differential gene expression of 3.575 ESTs clones from sugarcane libraries. Total RNA was extracted from two varieties, one known as tolerant (SP80-0185) and another known as susceptible (SP70-3370) to the ratoon stunting disease (RSD), after being inoculated with Lefsonia xyli subsp. xyli bacterial extracts, and used as probe. Out of the 3.575 ESTs, 49 showed differential expression levels. Most of the selected ESTs were found in the resistant variety, 41 being induced and 3 being repressed in response to bacterial inoculation. On the other hand, the susceptible variety showed only 5 differentially expressed genes, 2 being induced and 3 being repressed. These results indicate that the tolerance to bacterial infection could be associated to extracellular signal perception because ESTs associated to signal transduction pathways were induced in the variety SP80-185, e.g. plasma membrane H+ ATPase EST. Also, ESTs related to transcription factor expression, such as G-box, OsNAC6, “DNA binding”, MYB family, Zinc Finger were induced in the tolerant variety after infection. An EST with high similarity to G-Box binding factor, a cis-DNA sequence present in some plant promoter genes required to signal transduction for environmental signals, was also induced. Even though the susceptible variety had no significant difference in gene expression, a lipase-like EST was repressed when plants were infected. Lipase, a membrane enzyme, is also involved in jasmonate biosynthesis, which plays a major role in plant defense mechanisms. Putative roles for induced and repressed genes in both tolerant and susceptible varieties are discussed here.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)UNESP Universidade Estadual Paulista, Via de Acesso Prof. Paulo Donato Castellane, Km 5, s/nBolsista da FAPESPInstituto BiológicoCentro de Tecnologia Canavieira, Caixa Postal 162UNESP Universidade Estadual Paulista, Via de Acesso Prof. Paulo Donato Castellane, Km 5, s/nUniversidade Estadual Paulista (UNESP)Bolsista da FAPESPInstituto BiológicoCentro de Tecnologia CanavieiraTiraboschi Ferro, Maria Inês [UNESP]De Barros, Neli Martins [UNESP]Dabbas, Karina Maria [UNESP]De Laia, Marcelo Luiz [UNESP]Kupper, Katia Cristina [UNESP]De Moraes, Vicente AlbertoDe Oliveira, Julio Cezar Franco [UNESP]Ferro, Jesus Aparecido [UNESP]Zingaretti, Sonia Maria [UNESP]2022-04-29T08:47:49Z2022-04-29T08:47:49Z2007-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article154-166Summa Phytopathologica, v. 33, n. 2, p. 154-166, 2007.0100-5405http://hdl.handle.net/11449/2318542-s2.0-57649145815Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPporSumma Phytopathologicainfo:eu-repo/semantics/openAccess2022-04-29T08:47:49Zoai:repositorio.unesp.br:11449/231854Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462022-04-29T08:47:49Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Differential gene expression in sugar cane infected by leifsonia xyli subsp. Xyli
Análise do perfil de expressão dos genes da cana-de-açúcar envolvidos na interação com Leifsonia xyli subsp. Xyli
title Differential gene expression in sugar cane infected by leifsonia xyli subsp. Xyli
spellingShingle Differential gene expression in sugar cane infected by leifsonia xyli subsp. Xyli
Tiraboschi Ferro, Maria Inês [UNESP]
CDNA macroarray
Plant-pathogen interaction
Ratoon stunting disease
Sugarcane
title_short Differential gene expression in sugar cane infected by leifsonia xyli subsp. Xyli
title_full Differential gene expression in sugar cane infected by leifsonia xyli subsp. Xyli
title_fullStr Differential gene expression in sugar cane infected by leifsonia xyli subsp. Xyli
title_full_unstemmed Differential gene expression in sugar cane infected by leifsonia xyli subsp. Xyli
title_sort Differential gene expression in sugar cane infected by leifsonia xyli subsp. Xyli
author Tiraboschi Ferro, Maria Inês [UNESP]
author_facet Tiraboschi Ferro, Maria Inês [UNESP]
De Barros, Neli Martins [UNESP]
Dabbas, Karina Maria [UNESP]
De Laia, Marcelo Luiz [UNESP]
Kupper, Katia Cristina [UNESP]
De Moraes, Vicente Alberto
De Oliveira, Julio Cezar Franco [UNESP]
Ferro, Jesus Aparecido [UNESP]
Zingaretti, Sonia Maria [UNESP]
author_role author
author2 De Barros, Neli Martins [UNESP]
Dabbas, Karina Maria [UNESP]
De Laia, Marcelo Luiz [UNESP]
Kupper, Katia Cristina [UNESP]
De Moraes, Vicente Alberto
De Oliveira, Julio Cezar Franco [UNESP]
Ferro, Jesus Aparecido [UNESP]
Zingaretti, Sonia Maria [UNESP]
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
Bolsista da FAPESP
Instituto Biológico
Centro de Tecnologia Canavieira
dc.contributor.author.fl_str_mv Tiraboschi Ferro, Maria Inês [UNESP]
De Barros, Neli Martins [UNESP]
Dabbas, Karina Maria [UNESP]
De Laia, Marcelo Luiz [UNESP]
Kupper, Katia Cristina [UNESP]
De Moraes, Vicente Alberto
De Oliveira, Julio Cezar Franco [UNESP]
Ferro, Jesus Aparecido [UNESP]
Zingaretti, Sonia Maria [UNESP]
dc.subject.por.fl_str_mv CDNA macroarray
Plant-pathogen interaction
Ratoon stunting disease
Sugarcane
topic CDNA macroarray
Plant-pathogen interaction
Ratoon stunting disease
Sugarcane
description The macroarray nylon membrane technology was used to study the differential gene expression of 3.575 ESTs clones from sugarcane libraries. Total RNA was extracted from two varieties, one known as tolerant (SP80-0185) and another known as susceptible (SP70-3370) to the ratoon stunting disease (RSD), after being inoculated with Lefsonia xyli subsp. xyli bacterial extracts, and used as probe. Out of the 3.575 ESTs, 49 showed differential expression levels. Most of the selected ESTs were found in the resistant variety, 41 being induced and 3 being repressed in response to bacterial inoculation. On the other hand, the susceptible variety showed only 5 differentially expressed genes, 2 being induced and 3 being repressed. These results indicate that the tolerance to bacterial infection could be associated to extracellular signal perception because ESTs associated to signal transduction pathways were induced in the variety SP80-185, e.g. plasma membrane H+ ATPase EST. Also, ESTs related to transcription factor expression, such as G-box, OsNAC6, “DNA binding”, MYB family, Zinc Finger were induced in the tolerant variety after infection. An EST with high similarity to G-Box binding factor, a cis-DNA sequence present in some plant promoter genes required to signal transduction for environmental signals, was also induced. Even though the susceptible variety had no significant difference in gene expression, a lipase-like EST was repressed when plants were infected. Lipase, a membrane enzyme, is also involved in jasmonate biosynthesis, which plays a major role in plant defense mechanisms. Putative roles for induced and repressed genes in both tolerant and susceptible varieties are discussed here.
publishDate 2007
dc.date.none.fl_str_mv 2007-01-01
2022-04-29T08:47:49Z
2022-04-29T08:47:49Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Summa Phytopathologica, v. 33, n. 2, p. 154-166, 2007.
0100-5405
http://hdl.handle.net/11449/231854
2-s2.0-57649145815
identifier_str_mv Summa Phytopathologica, v. 33, n. 2, p. 154-166, 2007.
0100-5405
2-s2.0-57649145815
url http://hdl.handle.net/11449/231854
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv Summa Phytopathologica
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 154-166
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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