Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid
Autor(a) principal: | |
---|---|
Data de Publicação: | 2013 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.9735/0975-5276.5.1.357-362 http://hdl.handle.net/11449/133722 |
Resumo: | Background- The evaluation of the effects of new compounds and nonconventional anti-tuberculous drugs have grown and become increas-ingly more popular in recent years. Studies have shown anti-tuberculous activity for Ruthenium complexes, including organometallic com-pounds containing phosphine ligands such as picolinic acid generating great expectations and hopes. Methods- The Representational Difference Analysis (RDA) was applied in order to gain insight about differences in expression of Mycobacte-rium tuberculosis H37Rv exposed to [Ru(dppb)(pic)(bypy)] PF6 (SCAR1) and isoniazid (INH). Total RNA was extracted from the bacillus not exposed and exposed to SCAR1 and INH separately at concentration of MIC for 12 hours at 35°C. RDA was carried out and differentially expressed products were sequenced. Results- RDA-sequencing identified, for both compounds, orthologs that encode hypothetical and predict proteins. One related cell wall syn-thesis gene, identified by RDA, and genes related to INH target as inhA, katG and ahpC had their expression confirmed and quantified by real-time PCR. The gene encoding the cell wall associated hydrolase was induced 4.627 and 1.189, inhA 0.983 and 1.027, katG 1.111 and 1.345 and ahpC 1.063 and 1.039 fold after exposure to SCAR1 and INH respectively, compared to not exposed growth. Conclusion- The RDA brings, for the first time, directions to study related genes with metabolic pathways of SCAR1. RDA and Real-Time PCR highlight the idea that one of the SCAR1 interaction, in M tuberculosis may be in the cell wall biosynthesis considering the differential expression of a cell wall hydrolase and warrants further investigation. |
id |
UNSP_3112cac20f646036313fbae6011ec02e |
---|---|
oai_identifier_str |
oai:repositorio.unesp.br:11449/133722 |
network_acronym_str |
UNSP |
network_name_str |
Repositório Institucional da UNESP |
repository_id_str |
2946 |
spelling |
Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazidMycobacterium tuberculosisIsoniazidRutheniumcDNA-RDABackground- The evaluation of the effects of new compounds and nonconventional anti-tuberculous drugs have grown and become increas-ingly more popular in recent years. Studies have shown anti-tuberculous activity for Ruthenium complexes, including organometallic com-pounds containing phosphine ligands such as picolinic acid generating great expectations and hopes. Methods- The Representational Difference Analysis (RDA) was applied in order to gain insight about differences in expression of Mycobacte-rium tuberculosis H37Rv exposed to [Ru(dppb)(pic)(bypy)] PF6 (SCAR1) and isoniazid (INH). Total RNA was extracted from the bacillus not exposed and exposed to SCAR1 and INH separately at concentration of MIC for 12 hours at 35°C. RDA was carried out and differentially expressed products were sequenced. Results- RDA-sequencing identified, for both compounds, orthologs that encode hypothetical and predict proteins. One related cell wall syn-thesis gene, identified by RDA, and genes related to INH target as inhA, katG and ahpC had their expression confirmed and quantified by real-time PCR. The gene encoding the cell wall associated hydrolase was induced 4.627 and 1.189, inhA 0.983 and 1.027, katG 1.111 and 1.345 and ahpC 1.063 and 1.039 fold after exposure to SCAR1 and INH respectively, compared to not exposed growth. Conclusion- The RDA brings, for the first time, directions to study related genes with metabolic pathways of SCAR1. RDA and Real-Time PCR highlight the idea that one of the SCAR1 interaction, in M tuberculosis may be in the cell wall biosynthesis considering the differential expression of a cell wall hydrolase and warrants further investigation.Universidade Estadual Paulista Júlio de Mesquita Filho, Departamento de Ciências Biológicas, Faculdade de Ciências Farmacêuticas de Araraquara, Araraquara, Rodovia Araraquara/Jaú Km 1, Campus, CEP 14801902, SP, BrasilDepartment of Clinical Analysis and Biomedicine, State University of MaringáDepartment of Chemistry, Federal University of São CarlosUniversidade Estadual Paulista Júlio de Mesquita Filho, Departamento de Ciências Biológicas, Faculdade de Ciências Farmacêuticas de Araraquara, Araraquara, Rodovia Araraquara/Jaú Km 1, Campus, CEP 14801902, SP, BrasilUniversidade Estadual Paulista (Unesp)Universidade Estadual de Maringá (UEM)Universidade de São Paulo (USP)Universidade Federal de São Carlos (UFSCar)Leite, G. G. S.Baeza, L. C.Batista, A. A.Barbosa, M. I. F.Pavan, Fernando Rogério [UNESP]Leite, C. Q. F.Silva, J. L.Hirata, R. D. C.Hirata, M. H.Cardoso, Rosilene Fressati2016-01-28T16:56:19Z2016-01-28T16:56:19Z2013info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article357-362application/pdfhttp://dx.doi.org/10.9735/0975-5276.5.1.357-362International Journal of Microbiology Research, v. 5, n. 1, p. 357-362, 2013.0975-9174http://hdl.handle.net/11449/13372210.9735/0975-5276.5.1.357-362ISSN0975-9174-2013-05-01-357-362.pdf98185970769712272114570774349859Currículo Lattesreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengInternational Journal of Microbiology Researchinfo:eu-repo/semantics/openAccess2024-06-24T13:08:36Zoai:repositorio.unesp.br:11449/133722Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-06T00:04:51.603606Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid |
title |
Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid |
spellingShingle |
Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid Leite, G. G. S. Mycobacterium tuberculosis Isoniazid Ruthenium cDNA-RDA |
title_short |
Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid |
title_full |
Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid |
title_fullStr |
Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid |
title_full_unstemmed |
Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid |
title_sort |
Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid |
author |
Leite, G. G. S. |
author_facet |
Leite, G. G. S. Baeza, L. C. Batista, A. A. Barbosa, M. I. F. Pavan, Fernando Rogério [UNESP] Leite, C. Q. F. Silva, J. L. Hirata, R. D. C. Hirata, M. H. Cardoso, Rosilene Fressati |
author_role |
author |
author2 |
Baeza, L. C. Batista, A. A. Barbosa, M. I. F. Pavan, Fernando Rogério [UNESP] Leite, C. Q. F. Silva, J. L. Hirata, R. D. C. Hirata, M. H. Cardoso, Rosilene Fressati |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade Estadual de Maringá (UEM) Universidade de São Paulo (USP) Universidade Federal de São Carlos (UFSCar) |
dc.contributor.author.fl_str_mv |
Leite, G. G. S. Baeza, L. C. Batista, A. A. Barbosa, M. I. F. Pavan, Fernando Rogério [UNESP] Leite, C. Q. F. Silva, J. L. Hirata, R. D. C. Hirata, M. H. Cardoso, Rosilene Fressati |
dc.subject.por.fl_str_mv |
Mycobacterium tuberculosis Isoniazid Ruthenium cDNA-RDA |
topic |
Mycobacterium tuberculosis Isoniazid Ruthenium cDNA-RDA |
description |
Background- The evaluation of the effects of new compounds and nonconventional anti-tuberculous drugs have grown and become increas-ingly more popular in recent years. Studies have shown anti-tuberculous activity for Ruthenium complexes, including organometallic com-pounds containing phosphine ligands such as picolinic acid generating great expectations and hopes. Methods- The Representational Difference Analysis (RDA) was applied in order to gain insight about differences in expression of Mycobacte-rium tuberculosis H37Rv exposed to [Ru(dppb)(pic)(bypy)] PF6 (SCAR1) and isoniazid (INH). Total RNA was extracted from the bacillus not exposed and exposed to SCAR1 and INH separately at concentration of MIC for 12 hours at 35°C. RDA was carried out and differentially expressed products were sequenced. Results- RDA-sequencing identified, for both compounds, orthologs that encode hypothetical and predict proteins. One related cell wall syn-thesis gene, identified by RDA, and genes related to INH target as inhA, katG and ahpC had their expression confirmed and quantified by real-time PCR. The gene encoding the cell wall associated hydrolase was induced 4.627 and 1.189, inhA 0.983 and 1.027, katG 1.111 and 1.345 and ahpC 1.063 and 1.039 fold after exposure to SCAR1 and INH respectively, compared to not exposed growth. Conclusion- The RDA brings, for the first time, directions to study related genes with metabolic pathways of SCAR1. RDA and Real-Time PCR highlight the idea that one of the SCAR1 interaction, in M tuberculosis may be in the cell wall biosynthesis considering the differential expression of a cell wall hydrolase and warrants further investigation. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013 2016-01-28T16:56:19Z 2016-01-28T16:56:19Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.9735/0975-5276.5.1.357-362 International Journal of Microbiology Research, v. 5, n. 1, p. 357-362, 2013. 0975-9174 http://hdl.handle.net/11449/133722 10.9735/0975-5276.5.1.357-362 ISSN0975-9174-2013-05-01-357-362.pdf 9818597076971227 2114570774349859 |
url |
http://dx.doi.org/10.9735/0975-5276.5.1.357-362 http://hdl.handle.net/11449/133722 |
identifier_str_mv |
International Journal of Microbiology Research, v. 5, n. 1, p. 357-362, 2013. 0975-9174 10.9735/0975-5276.5.1.357-362 ISSN0975-9174-2013-05-01-357-362.pdf 9818597076971227 2114570774349859 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
International Journal of Microbiology Research |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
357-362 application/pdf |
dc.source.none.fl_str_mv |
Currículo Lattes reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129580642336768 |