Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid

Detalhes bibliográficos
Autor(a) principal: Leite, G. G. S.
Data de Publicação: 2013
Outros Autores: Baeza, L. C., Batista, A. A., Barbosa, M. I. F., Pavan, Fernando Rogério [UNESP], Leite, C. Q. F., Silva, J. L., Hirata, R. D. C., Hirata, M. H., Cardoso, Rosilene Fressati
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.9735/0975-5276.5.1.357-362
http://hdl.handle.net/11449/133722
Resumo: Background- The evaluation of the effects of new compounds and nonconventional anti-tuberculous drugs have grown and become increas-ingly more popular in recent years. Studies have shown anti-tuberculous activity for Ruthenium complexes, including organometallic com-pounds containing phosphine ligands such as picolinic acid generating great expectations and hopes. Methods- The Representational Difference Analysis (RDA) was applied in order to gain insight about differences in expression of Mycobacte-rium tuberculosis H37Rv exposed to [Ru(dppb)(pic)(bypy)] PF6 (SCAR1) and isoniazid (INH). Total RNA was extracted from the bacillus not exposed and exposed to SCAR1 and INH separately at concentration of MIC for 12 hours at 35°C. RDA was carried out and differentially expressed products were sequenced. Results- RDA-sequencing identified, for both compounds, orthologs that encode hypothetical and predict proteins. One related cell wall syn-thesis gene, identified by RDA, and genes related to INH target as inhA, katG and ahpC had their expression confirmed and quantified by real-time PCR. The gene encoding the cell wall associated hydrolase was induced 4.627 and 1.189, inhA 0.983 and 1.027, katG 1.111 and 1.345 and ahpC 1.063 and 1.039 fold after exposure to SCAR1 and INH respectively, compared to not exposed growth. Conclusion- The RDA brings, for the first time, directions to study related genes with metabolic pathways of SCAR1. RDA and Real-Time PCR highlight the idea that one of the SCAR1 interaction, in M tuberculosis may be in the cell wall biosynthesis considering the differential expression of a cell wall hydrolase and warrants further investigation.
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spelling Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazidMycobacterium tuberculosisIsoniazidRutheniumcDNA-RDABackground- The evaluation of the effects of new compounds and nonconventional anti-tuberculous drugs have grown and become increas-ingly more popular in recent years. Studies have shown anti-tuberculous activity for Ruthenium complexes, including organometallic com-pounds containing phosphine ligands such as picolinic acid generating great expectations and hopes. Methods- The Representational Difference Analysis (RDA) was applied in order to gain insight about differences in expression of Mycobacte-rium tuberculosis H37Rv exposed to [Ru(dppb)(pic)(bypy)] PF6 (SCAR1) and isoniazid (INH). Total RNA was extracted from the bacillus not exposed and exposed to SCAR1 and INH separately at concentration of MIC for 12 hours at 35°C. RDA was carried out and differentially expressed products were sequenced. Results- RDA-sequencing identified, for both compounds, orthologs that encode hypothetical and predict proteins. One related cell wall syn-thesis gene, identified by RDA, and genes related to INH target as inhA, katG and ahpC had their expression confirmed and quantified by real-time PCR. The gene encoding the cell wall associated hydrolase was induced 4.627 and 1.189, inhA 0.983 and 1.027, katG 1.111 and 1.345 and ahpC 1.063 and 1.039 fold after exposure to SCAR1 and INH respectively, compared to not exposed growth. Conclusion- The RDA brings, for the first time, directions to study related genes with metabolic pathways of SCAR1. RDA and Real-Time PCR highlight the idea that one of the SCAR1 interaction, in M tuberculosis may be in the cell wall biosynthesis considering the differential expression of a cell wall hydrolase and warrants further investigation.Universidade Estadual Paulista Júlio de Mesquita Filho, Departamento de Ciências Biológicas, Faculdade de Ciências Farmacêuticas de Araraquara, Araraquara, Rodovia Araraquara/Jaú Km 1, Campus, CEP 14801902, SP, BrasilDepartment of Clinical Analysis and Biomedicine, State University of MaringáDepartment of Chemistry, Federal University of São CarlosUniversidade Estadual Paulista Júlio de Mesquita Filho, Departamento de Ciências Biológicas, Faculdade de Ciências Farmacêuticas de Araraquara, Araraquara, Rodovia Araraquara/Jaú Km 1, Campus, CEP 14801902, SP, BrasilUniversidade Estadual Paulista (Unesp)Universidade Estadual de Maringá (UEM)Universidade de São Paulo (USP)Universidade Federal de São Carlos (UFSCar)Leite, G. G. S.Baeza, L. C.Batista, A. A.Barbosa, M. I. F.Pavan, Fernando Rogério [UNESP]Leite, C. Q. F.Silva, J. L.Hirata, R. D. C.Hirata, M. H.Cardoso, Rosilene Fressati2016-01-28T16:56:19Z2016-01-28T16:56:19Z2013info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article357-362application/pdfhttp://dx.doi.org/10.9735/0975-5276.5.1.357-362International Journal of Microbiology Research, v. 5, n. 1, p. 357-362, 2013.0975-9174http://hdl.handle.net/11449/13372210.9735/0975-5276.5.1.357-362ISSN0975-9174-2013-05-01-357-362.pdf98185970769712272114570774349859Currículo Lattesreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengInternational Journal of Microbiology Researchinfo:eu-repo/semantics/openAccess2024-06-24T13:08:36Zoai:repositorio.unesp.br:11449/133722Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-06T00:04:51.603606Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid
title Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid
spellingShingle Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid
Leite, G. G. S.
Mycobacterium tuberculosis
Isoniazid
Ruthenium
cDNA-RDA
title_short Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid
title_full Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid
title_fullStr Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid
title_full_unstemmed Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid
title_sort Genes differentially expressed by Mycobacterium tuberculosis after exposure to ruthenium phosphinic compound and isoniazid
author Leite, G. G. S.
author_facet Leite, G. G. S.
Baeza, L. C.
Batista, A. A.
Barbosa, M. I. F.
Pavan, Fernando Rogério [UNESP]
Leite, C. Q. F.
Silva, J. L.
Hirata, R. D. C.
Hirata, M. H.
Cardoso, Rosilene Fressati
author_role author
author2 Baeza, L. C.
Batista, A. A.
Barbosa, M. I. F.
Pavan, Fernando Rogério [UNESP]
Leite, C. Q. F.
Silva, J. L.
Hirata, R. D. C.
Hirata, M. H.
Cardoso, Rosilene Fressati
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade Estadual de Maringá (UEM)
Universidade de São Paulo (USP)
Universidade Federal de São Carlos (UFSCar)
dc.contributor.author.fl_str_mv Leite, G. G. S.
Baeza, L. C.
Batista, A. A.
Barbosa, M. I. F.
Pavan, Fernando Rogério [UNESP]
Leite, C. Q. F.
Silva, J. L.
Hirata, R. D. C.
Hirata, M. H.
Cardoso, Rosilene Fressati
dc.subject.por.fl_str_mv Mycobacterium tuberculosis
Isoniazid
Ruthenium
cDNA-RDA
topic Mycobacterium tuberculosis
Isoniazid
Ruthenium
cDNA-RDA
description Background- The evaluation of the effects of new compounds and nonconventional anti-tuberculous drugs have grown and become increas-ingly more popular in recent years. Studies have shown anti-tuberculous activity for Ruthenium complexes, including organometallic com-pounds containing phosphine ligands such as picolinic acid generating great expectations and hopes. Methods- The Representational Difference Analysis (RDA) was applied in order to gain insight about differences in expression of Mycobacte-rium tuberculosis H37Rv exposed to [Ru(dppb)(pic)(bypy)] PF6 (SCAR1) and isoniazid (INH). Total RNA was extracted from the bacillus not exposed and exposed to SCAR1 and INH separately at concentration of MIC for 12 hours at 35°C. RDA was carried out and differentially expressed products were sequenced. Results- RDA-sequencing identified, for both compounds, orthologs that encode hypothetical and predict proteins. One related cell wall syn-thesis gene, identified by RDA, and genes related to INH target as inhA, katG and ahpC had their expression confirmed and quantified by real-time PCR. The gene encoding the cell wall associated hydrolase was induced 4.627 and 1.189, inhA 0.983 and 1.027, katG 1.111 and 1.345 and ahpC 1.063 and 1.039 fold after exposure to SCAR1 and INH respectively, compared to not exposed growth. Conclusion- The RDA brings, for the first time, directions to study related genes with metabolic pathways of SCAR1. RDA and Real-Time PCR highlight the idea that one of the SCAR1 interaction, in M tuberculosis may be in the cell wall biosynthesis considering the differential expression of a cell wall hydrolase and warrants further investigation.
publishDate 2013
dc.date.none.fl_str_mv 2013
2016-01-28T16:56:19Z
2016-01-28T16:56:19Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.9735/0975-5276.5.1.357-362
International Journal of Microbiology Research, v. 5, n. 1, p. 357-362, 2013.
0975-9174
http://hdl.handle.net/11449/133722
10.9735/0975-5276.5.1.357-362
ISSN0975-9174-2013-05-01-357-362.pdf
9818597076971227
2114570774349859
url http://dx.doi.org/10.9735/0975-5276.5.1.357-362
http://hdl.handle.net/11449/133722
identifier_str_mv International Journal of Microbiology Research, v. 5, n. 1, p. 357-362, 2013.
0975-9174
10.9735/0975-5276.5.1.357-362
ISSN0975-9174-2013-05-01-357-362.pdf
9818597076971227
2114570774349859
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv International Journal of Microbiology Research
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 357-362
application/pdf
dc.source.none.fl_str_mv Currículo Lattes
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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