Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.

Detalhes bibliográficos
Autor(a) principal: Ramos, Patricio
Data de Publicação: 2021
Outros Autores: Sepulveda-Garcia, Paulina, Alabí, Amir [UNESP], Romero, Alex, Pinto, Teresa, Rojas, Alejandro, Bittencourt, Pedro, Müller, Ananda
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.actatropica.2021.106046
http://hdl.handle.net/11449/229158
Resumo: This study aimed to perform a molecular survey and identification of hemotropic Mycoplasma spp. in domestic South American Camelids from Southern Chile. Conventional PCR (cPCR) for hemotropic Mycoplasma spp. based on 16S rRNA gene (620bp fragment) was performed in 87 EDTA-blood samples taken from 48 llamas (Lama glama) and 39 and alpacas (Vicugna pacos) from to Temuco, La Araucanía region and Valdivia, Los Rios region, Southern Chile. 16S rRNA hemotropic Mycoplasma PCR-positive were sequenced for species identification, phylogenetic and haplotype analyses, and further tested by cPCR targeting a fragment (160-210 bp) of the RNaseP (rnpB) gene. Based upon 16S rRNA cPCR results, the overall hemotropic Mycoplasma spp. occurrence in Southern camelids was 9.2% (8/87 [95% CI (4.0–17.3%)]), with five positive alpacas (12.8%; 5/39 [95% CI (4.3–27.4%)]) and three llamas (6.3%; 3/48 [95% CI (1.7–17.2%)]). All 16S rRNA PCR-positive samples were negative for the rnpB gene. Obtained 16S sequences presented high identity (99-100%) by BLASTn analysis to ‘Candidatus Mycoplasma haemolamae’ from an alpaca in the United Kingdom. Phylogenetic and haplotype analyses of the 16s rRNA gene showed high similarity among ‘Candidatus M. haemolamae’ sequences of this study and the ones from North America, Europe, and Asia evidencing a low diversity of Chilean samples, with only one haplotype detected (#1). Haplotype #1 from South American Camelids in Chile was worldwide distributed and observed in North America, Europe, and Asia. ‘Candidatus M. haemolamae’ detected for the first time in South American camelids in Southern Chile had low diversity and was worldwide spread.
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spelling Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.CamelidsHemoplasmaHemotropic Mycoplasma spp.PCRSouth AmericaThis study aimed to perform a molecular survey and identification of hemotropic Mycoplasma spp. in domestic South American Camelids from Southern Chile. Conventional PCR (cPCR) for hemotropic Mycoplasma spp. based on 16S rRNA gene (620bp fragment) was performed in 87 EDTA-blood samples taken from 48 llamas (Lama glama) and 39 and alpacas (Vicugna pacos) from to Temuco, La Araucanía region and Valdivia, Los Rios region, Southern Chile. 16S rRNA hemotropic Mycoplasma PCR-positive were sequenced for species identification, phylogenetic and haplotype analyses, and further tested by cPCR targeting a fragment (160-210 bp) of the RNaseP (rnpB) gene. Based upon 16S rRNA cPCR results, the overall hemotropic Mycoplasma spp. occurrence in Southern camelids was 9.2% (8/87 [95% CI (4.0–17.3%)]), with five positive alpacas (12.8%; 5/39 [95% CI (4.3–27.4%)]) and three llamas (6.3%; 3/48 [95% CI (1.7–17.2%)]). All 16S rRNA PCR-positive samples were negative for the rnpB gene. Obtained 16S sequences presented high identity (99-100%) by BLASTn analysis to ‘Candidatus Mycoplasma haemolamae’ from an alpaca in the United Kingdom. Phylogenetic and haplotype analyses of the 16s rRNA gene showed high similarity among ‘Candidatus M. haemolamae’ sequences of this study and the ones from North America, Europe, and Asia evidencing a low diversity of Chilean samples, with only one haplotype detected (#1). Haplotype #1 from South American Camelids in Chile was worldwide distributed and observed in North America, Europe, and Asia. ‘Candidatus M. haemolamae’ detected for the first time in South American camelids in Southern Chile had low diversity and was worldwide spread.Institudo de Ciencias Clínicas Veterinarias Facultad de Ciencias Veterinarias Universidad Austral de ChileDepartamento de Patologia UNESP Teriogenologia e Saúde Única—Faculdade de Ciências Agrárias e Veterinarias Universidade Estadual Paulista (FCAV), JaboticabalLaboratorio de Inmunología y Estrés de Organismos Acuáticos Instituto de Patología Animal Facultad de Ciencias Veterinarias Universidad Austral de ChileInstitute of Medicine and Center for Interdisciplinary Studies on the Nervous System CISNE Universidad Austral de ChileBiomedical Sciences Department Ross University School of Veterinary MedicineDepartamento de Patologia UNESP Teriogenologia e Saúde Única—Faculdade de Ciências Agrárias e Veterinarias Universidade Estadual Paulista (FCAV), JaboticabalUniversidad Austral de ChileUniversidade Estadual Paulista (UNESP)Ross University School of Veterinary MedicineRamos, PatricioSepulveda-Garcia, PaulinaAlabí, Amir [UNESP]Romero, AlexPinto, TeresaRojas, AlejandroBittencourt, PedroMüller, Ananda2022-04-29T08:30:45Z2022-04-29T08:30:45Z2021-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.actatropica.2021.106046Acta Tropica, v. 222.1873-62540001-706Xhttp://hdl.handle.net/11449/22915810.1016/j.actatropica.2021.1060462-s2.0-85110494853Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengActa Tropicainfo:eu-repo/semantics/openAccess2024-06-07T13:01:45Zoai:repositorio.unesp.br:11449/229158Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:37:07.776270Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.
title Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.
spellingShingle Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.
Ramos, Patricio
Camelids
Hemoplasma
Hemotropic Mycoplasma spp.
PCR
South America
title_short Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.
title_full Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.
title_fullStr Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.
title_full_unstemmed Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.
title_sort Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.
author Ramos, Patricio
author_facet Ramos, Patricio
Sepulveda-Garcia, Paulina
Alabí, Amir [UNESP]
Romero, Alex
Pinto, Teresa
Rojas, Alejandro
Bittencourt, Pedro
Müller, Ananda
author_role author
author2 Sepulveda-Garcia, Paulina
Alabí, Amir [UNESP]
Romero, Alex
Pinto, Teresa
Rojas, Alejandro
Bittencourt, Pedro
Müller, Ananda
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidad Austral de Chile
Universidade Estadual Paulista (UNESP)
Ross University School of Veterinary Medicine
dc.contributor.author.fl_str_mv Ramos, Patricio
Sepulveda-Garcia, Paulina
Alabí, Amir [UNESP]
Romero, Alex
Pinto, Teresa
Rojas, Alejandro
Bittencourt, Pedro
Müller, Ananda
dc.subject.por.fl_str_mv Camelids
Hemoplasma
Hemotropic Mycoplasma spp.
PCR
South America
topic Camelids
Hemoplasma
Hemotropic Mycoplasma spp.
PCR
South America
description This study aimed to perform a molecular survey and identification of hemotropic Mycoplasma spp. in domestic South American Camelids from Southern Chile. Conventional PCR (cPCR) for hemotropic Mycoplasma spp. based on 16S rRNA gene (620bp fragment) was performed in 87 EDTA-blood samples taken from 48 llamas (Lama glama) and 39 and alpacas (Vicugna pacos) from to Temuco, La Araucanía region and Valdivia, Los Rios region, Southern Chile. 16S rRNA hemotropic Mycoplasma PCR-positive were sequenced for species identification, phylogenetic and haplotype analyses, and further tested by cPCR targeting a fragment (160-210 bp) of the RNaseP (rnpB) gene. Based upon 16S rRNA cPCR results, the overall hemotropic Mycoplasma spp. occurrence in Southern camelids was 9.2% (8/87 [95% CI (4.0–17.3%)]), with five positive alpacas (12.8%; 5/39 [95% CI (4.3–27.4%)]) and three llamas (6.3%; 3/48 [95% CI (1.7–17.2%)]). All 16S rRNA PCR-positive samples were negative for the rnpB gene. Obtained 16S sequences presented high identity (99-100%) by BLASTn analysis to ‘Candidatus Mycoplasma haemolamae’ from an alpaca in the United Kingdom. Phylogenetic and haplotype analyses of the 16s rRNA gene showed high similarity among ‘Candidatus M. haemolamae’ sequences of this study and the ones from North America, Europe, and Asia evidencing a low diversity of Chilean samples, with only one haplotype detected (#1). Haplotype #1 from South American Camelids in Chile was worldwide distributed and observed in North America, Europe, and Asia. ‘Candidatus M. haemolamae’ detected for the first time in South American camelids in Southern Chile had low diversity and was worldwide spread.
publishDate 2021
dc.date.none.fl_str_mv 2021-10-01
2022-04-29T08:30:45Z
2022-04-29T08:30:45Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.actatropica.2021.106046
Acta Tropica, v. 222.
1873-6254
0001-706X
http://hdl.handle.net/11449/229158
10.1016/j.actatropica.2021.106046
2-s2.0-85110494853
url http://dx.doi.org/10.1016/j.actatropica.2021.106046
http://hdl.handle.net/11449/229158
identifier_str_mv Acta Tropica, v. 222.
1873-6254
0001-706X
10.1016/j.actatropica.2021.106046
2-s2.0-85110494853
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Acta Tropica
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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