Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.actatropica.2021.106046 http://hdl.handle.net/11449/229158 |
Resumo: | This study aimed to perform a molecular survey and identification of hemotropic Mycoplasma spp. in domestic South American Camelids from Southern Chile. Conventional PCR (cPCR) for hemotropic Mycoplasma spp. based on 16S rRNA gene (620bp fragment) was performed in 87 EDTA-blood samples taken from 48 llamas (Lama glama) and 39 and alpacas (Vicugna pacos) from to Temuco, La Araucanía region and Valdivia, Los Rios region, Southern Chile. 16S rRNA hemotropic Mycoplasma PCR-positive were sequenced for species identification, phylogenetic and haplotype analyses, and further tested by cPCR targeting a fragment (160-210 bp) of the RNaseP (rnpB) gene. Based upon 16S rRNA cPCR results, the overall hemotropic Mycoplasma spp. occurrence in Southern camelids was 9.2% (8/87 [95% CI (4.0–17.3%)]), with five positive alpacas (12.8%; 5/39 [95% CI (4.3–27.4%)]) and three llamas (6.3%; 3/48 [95% CI (1.7–17.2%)]). All 16S rRNA PCR-positive samples were negative for the rnpB gene. Obtained 16S sequences presented high identity (99-100%) by BLASTn analysis to ‘Candidatus Mycoplasma haemolamae’ from an alpaca in the United Kingdom. Phylogenetic and haplotype analyses of the 16s rRNA gene showed high similarity among ‘Candidatus M. haemolamae’ sequences of this study and the ones from North America, Europe, and Asia evidencing a low diversity of Chilean samples, with only one haplotype detected (#1). Haplotype #1 from South American Camelids in Chile was worldwide distributed and observed in North America, Europe, and Asia. ‘Candidatus M. haemolamae’ detected for the first time in South American camelids in Southern Chile had low diversity and was worldwide spread. |
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Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile.CamelidsHemoplasmaHemotropic Mycoplasma spp.PCRSouth AmericaThis study aimed to perform a molecular survey and identification of hemotropic Mycoplasma spp. in domestic South American Camelids from Southern Chile. Conventional PCR (cPCR) for hemotropic Mycoplasma spp. based on 16S rRNA gene (620bp fragment) was performed in 87 EDTA-blood samples taken from 48 llamas (Lama glama) and 39 and alpacas (Vicugna pacos) from to Temuco, La Araucanía region and Valdivia, Los Rios region, Southern Chile. 16S rRNA hemotropic Mycoplasma PCR-positive were sequenced for species identification, phylogenetic and haplotype analyses, and further tested by cPCR targeting a fragment (160-210 bp) of the RNaseP (rnpB) gene. Based upon 16S rRNA cPCR results, the overall hemotropic Mycoplasma spp. occurrence in Southern camelids was 9.2% (8/87 [95% CI (4.0–17.3%)]), with five positive alpacas (12.8%; 5/39 [95% CI (4.3–27.4%)]) and three llamas (6.3%; 3/48 [95% CI (1.7–17.2%)]). All 16S rRNA PCR-positive samples were negative for the rnpB gene. Obtained 16S sequences presented high identity (99-100%) by BLASTn analysis to ‘Candidatus Mycoplasma haemolamae’ from an alpaca in the United Kingdom. Phylogenetic and haplotype analyses of the 16s rRNA gene showed high similarity among ‘Candidatus M. haemolamae’ sequences of this study and the ones from North America, Europe, and Asia evidencing a low diversity of Chilean samples, with only one haplotype detected (#1). Haplotype #1 from South American Camelids in Chile was worldwide distributed and observed in North America, Europe, and Asia. ‘Candidatus M. haemolamae’ detected for the first time in South American camelids in Southern Chile had low diversity and was worldwide spread.Institudo de Ciencias Clínicas Veterinarias Facultad de Ciencias Veterinarias Universidad Austral de ChileDepartamento de Patologia UNESP Teriogenologia e Saúde Única—Faculdade de Ciências Agrárias e Veterinarias Universidade Estadual Paulista (FCAV), JaboticabalLaboratorio de Inmunología y Estrés de Organismos Acuáticos Instituto de Patología Animal Facultad de Ciencias Veterinarias Universidad Austral de ChileInstitute of Medicine and Center for Interdisciplinary Studies on the Nervous System CISNE Universidad Austral de ChileBiomedical Sciences Department Ross University School of Veterinary MedicineDepartamento de Patologia UNESP Teriogenologia e Saúde Única—Faculdade de Ciências Agrárias e Veterinarias Universidade Estadual Paulista (FCAV), JaboticabalUniversidad Austral de ChileUniversidade Estadual Paulista (UNESP)Ross University School of Veterinary MedicineRamos, PatricioSepulveda-Garcia, PaulinaAlabí, Amir [UNESP]Romero, AlexPinto, TeresaRojas, AlejandroBittencourt, PedroMüller, Ananda2022-04-29T08:30:45Z2022-04-29T08:30:45Z2021-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.actatropica.2021.106046Acta Tropica, v. 222.1873-62540001-706Xhttp://hdl.handle.net/11449/22915810.1016/j.actatropica.2021.1060462-s2.0-85110494853Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengActa Tropicainfo:eu-repo/semantics/openAccess2024-06-07T13:01:45Zoai:repositorio.unesp.br:11449/229158Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:37:07.776270Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile. |
title |
Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile. |
spellingShingle |
Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile. Ramos, Patricio Camelids Hemoplasma Hemotropic Mycoplasma spp. PCR South America |
title_short |
Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile. |
title_full |
Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile. |
title_fullStr |
Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile. |
title_full_unstemmed |
Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile. |
title_sort |
Molecular survey and genetic characterization of ‘Candidatus Mycoplasma haemolamae’ in llamas (Lama glama) and alpacas (Vicugna pacos) from Southern Chile. |
author |
Ramos, Patricio |
author_facet |
Ramos, Patricio Sepulveda-Garcia, Paulina Alabí, Amir [UNESP] Romero, Alex Pinto, Teresa Rojas, Alejandro Bittencourt, Pedro Müller, Ananda |
author_role |
author |
author2 |
Sepulveda-Garcia, Paulina Alabí, Amir [UNESP] Romero, Alex Pinto, Teresa Rojas, Alejandro Bittencourt, Pedro Müller, Ananda |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidad Austral de Chile Universidade Estadual Paulista (UNESP) Ross University School of Veterinary Medicine |
dc.contributor.author.fl_str_mv |
Ramos, Patricio Sepulveda-Garcia, Paulina Alabí, Amir [UNESP] Romero, Alex Pinto, Teresa Rojas, Alejandro Bittencourt, Pedro Müller, Ananda |
dc.subject.por.fl_str_mv |
Camelids Hemoplasma Hemotropic Mycoplasma spp. PCR South America |
topic |
Camelids Hemoplasma Hemotropic Mycoplasma spp. PCR South America |
description |
This study aimed to perform a molecular survey and identification of hemotropic Mycoplasma spp. in domestic South American Camelids from Southern Chile. Conventional PCR (cPCR) for hemotropic Mycoplasma spp. based on 16S rRNA gene (620bp fragment) was performed in 87 EDTA-blood samples taken from 48 llamas (Lama glama) and 39 and alpacas (Vicugna pacos) from to Temuco, La Araucanía region and Valdivia, Los Rios region, Southern Chile. 16S rRNA hemotropic Mycoplasma PCR-positive were sequenced for species identification, phylogenetic and haplotype analyses, and further tested by cPCR targeting a fragment (160-210 bp) of the RNaseP (rnpB) gene. Based upon 16S rRNA cPCR results, the overall hemotropic Mycoplasma spp. occurrence in Southern camelids was 9.2% (8/87 [95% CI (4.0–17.3%)]), with five positive alpacas (12.8%; 5/39 [95% CI (4.3–27.4%)]) and three llamas (6.3%; 3/48 [95% CI (1.7–17.2%)]). All 16S rRNA PCR-positive samples were negative for the rnpB gene. Obtained 16S sequences presented high identity (99-100%) by BLASTn analysis to ‘Candidatus Mycoplasma haemolamae’ from an alpaca in the United Kingdom. Phylogenetic and haplotype analyses of the 16s rRNA gene showed high similarity among ‘Candidatus M. haemolamae’ sequences of this study and the ones from North America, Europe, and Asia evidencing a low diversity of Chilean samples, with only one haplotype detected (#1). Haplotype #1 from South American Camelids in Chile was worldwide distributed and observed in North America, Europe, and Asia. ‘Candidatus M. haemolamae’ detected for the first time in South American camelids in Southern Chile had low diversity and was worldwide spread. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-10-01 2022-04-29T08:30:45Z 2022-04-29T08:30:45Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.actatropica.2021.106046 Acta Tropica, v. 222. 1873-6254 0001-706X http://hdl.handle.net/11449/229158 10.1016/j.actatropica.2021.106046 2-s2.0-85110494853 |
url |
http://dx.doi.org/10.1016/j.actatropica.2021.106046 http://hdl.handle.net/11449/229158 |
identifier_str_mv |
Acta Tropica, v. 222. 1873-6254 0001-706X 10.1016/j.actatropica.2021.106046 2-s2.0-85110494853 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Acta Tropica |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
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1808128539972599808 |