Increased DSG2 plasmatic levels identified by transcriptomic-based secretome analysis is a potential prognostic biomarker in laryngeal carcinoma
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.oraloncology.2020.104592 http://hdl.handle.net/11449/201558 |
Resumo: | Objectives: The tumor secretome deconvolution is a promising strategy to identify diagnostic and prognostic biomarkers. Here, transcriptomic-based secretome analysis was performed aiming to discover laryngeal squamous cell carcinomas (LSCC) biomarkers from potentially secreted proteins (PSPs). Material and Methods: The tumor expression profile (35 LSCC biopsies compared with surrounding normal tissues - SN) revealed 589 overexpressed genes. This gene list was used for secretome analysis based on laryngeal tumors and related secretome databases. Results: Forty-nine (Laryngeal tumor secretome database) and 50 (Human Protein Atlas and Cancer Secretome Database) PSPs presented an association with worse overall survival. Specifically, DSG2 overexpression was strongly correlated with poor survival and distant metastasis. DSG2 increased expression was confirmed in the LSCC dataset (LSCC = 111; SN = 12) from TCGA. A significant association between shorter survival and DSG2 overexpression was also detected. In an independent cohort of cases, we analyzed and confirmed high protein levels of DSG2 in plasma from LSCC patients. Conclusion: A set of PSPs including the circulating DSG2, were associated with shorter overall survival in LSCC. DSG2 overexpression was also correlated with distant metastasis. The high plasmatic protein levels of DSG2 suggest its potential to be tested in liquid biopsies and applied as prognostic biomarker of LSCC. |
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Increased DSG2 plasmatic levels identified by transcriptomic-based secretome analysis is a potential prognostic biomarker in laryngeal carcinomaBiomarkerLaryngeal squamous cell carcinomaLiquid biopsySecretomeTranscriptomeObjectives: The tumor secretome deconvolution is a promising strategy to identify diagnostic and prognostic biomarkers. Here, transcriptomic-based secretome analysis was performed aiming to discover laryngeal squamous cell carcinomas (LSCC) biomarkers from potentially secreted proteins (PSPs). Material and Methods: The tumor expression profile (35 LSCC biopsies compared with surrounding normal tissues - SN) revealed 589 overexpressed genes. This gene list was used for secretome analysis based on laryngeal tumors and related secretome databases. Results: Forty-nine (Laryngeal tumor secretome database) and 50 (Human Protein Atlas and Cancer Secretome Database) PSPs presented an association with worse overall survival. Specifically, DSG2 overexpression was strongly correlated with poor survival and distant metastasis. DSG2 increased expression was confirmed in the LSCC dataset (LSCC = 111; SN = 12) from TCGA. A significant association between shorter survival and DSG2 overexpression was also detected. In an independent cohort of cases, we analyzed and confirmed high protein levels of DSG2 in plasma from LSCC patients. Conclusion: A set of PSPs including the circulating DSG2, were associated with shorter overall survival in LSCC. DSG2 overexpression was also correlated with distant metastasis. The high plasmatic protein levels of DSG2 suggest its potential to be tested in liquid biopsies and applied as prognostic biomarker of LSCC.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Uddannelses- og ForskningsministerietDepartment of Structural and Functional Biology Institute of Biosciences São Paulo State University (UNESP)Department of Chemical and Biological Sciences Institute of Biosciences São Paulo State University (UNESP)Department of Head and Neck Surgery and Otorhinolaryngology A.C. Camargo Cancer CenterInternational Research Center CIPE – A.C. Camargo Cancer CenterDepartment of Pathology Faculty of Medicine São Paulo State University (UNESP)Department of Pathology A.C. Camargo Cancer CenterDepartment of Clinical Genetics University Hospital Institute of Regional Health Research University of Southern DenmarkDepartment of Structural and Functional Biology Institute of Biosciences São Paulo State University (UNESP)Department of Chemical and Biological Sciences Institute of Biosciences São Paulo State University (UNESP)Department of Pathology Faculty of Medicine São Paulo State University (UNESP)Universidade Estadual Paulista (Unesp)A.C. Camargo Cancer CenterCIPE – A.C. Camargo Cancer CenterUniversity of Southern DenmarkCury, Sarah Santiloni [UNESP]Lapa, Rainer Marco Lopez [UNESP]de Mello, Julia Bette HomemMarchi, Fábio AlbuquerqueDomingues, Maria Aparecida Custódio [UNESP]Pinto, Clóvis Antonio LopesCarvalho, Robson Francisco [UNESP]de Carvalho, Genival BarbosaKowalski, Luiz PauloRogatto, Silvia Regina2020-12-12T02:35:43Z2020-12-12T02:35:43Z2020-04-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.oraloncology.2020.104592Oral Oncology, v. 103.1879-05931368-8375http://hdl.handle.net/11449/20155810.1016/j.oraloncology.2020.1045922-s2.0-85079538957Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengOral Oncologyinfo:eu-repo/semantics/openAccess2021-10-22T20:18:56Zoai:repositorio.unesp.br:11449/201558Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:21:38.861093Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Increased DSG2 plasmatic levels identified by transcriptomic-based secretome analysis is a potential prognostic biomarker in laryngeal carcinoma |
title |
Increased DSG2 plasmatic levels identified by transcriptomic-based secretome analysis is a potential prognostic biomarker in laryngeal carcinoma |
spellingShingle |
Increased DSG2 plasmatic levels identified by transcriptomic-based secretome analysis is a potential prognostic biomarker in laryngeal carcinoma Cury, Sarah Santiloni [UNESP] Biomarker Laryngeal squamous cell carcinoma Liquid biopsy Secretome Transcriptome |
title_short |
Increased DSG2 plasmatic levels identified by transcriptomic-based secretome analysis is a potential prognostic biomarker in laryngeal carcinoma |
title_full |
Increased DSG2 plasmatic levels identified by transcriptomic-based secretome analysis is a potential prognostic biomarker in laryngeal carcinoma |
title_fullStr |
Increased DSG2 plasmatic levels identified by transcriptomic-based secretome analysis is a potential prognostic biomarker in laryngeal carcinoma |
title_full_unstemmed |
Increased DSG2 plasmatic levels identified by transcriptomic-based secretome analysis is a potential prognostic biomarker in laryngeal carcinoma |
title_sort |
Increased DSG2 plasmatic levels identified by transcriptomic-based secretome analysis is a potential prognostic biomarker in laryngeal carcinoma |
author |
Cury, Sarah Santiloni [UNESP] |
author_facet |
Cury, Sarah Santiloni [UNESP] Lapa, Rainer Marco Lopez [UNESP] de Mello, Julia Bette Homem Marchi, Fábio Albuquerque Domingues, Maria Aparecida Custódio [UNESP] Pinto, Clóvis Antonio Lopes Carvalho, Robson Francisco [UNESP] de Carvalho, Genival Barbosa Kowalski, Luiz Paulo Rogatto, Silvia Regina |
author_role |
author |
author2 |
Lapa, Rainer Marco Lopez [UNESP] de Mello, Julia Bette Homem Marchi, Fábio Albuquerque Domingues, Maria Aparecida Custódio [UNESP] Pinto, Clóvis Antonio Lopes Carvalho, Robson Francisco [UNESP] de Carvalho, Genival Barbosa Kowalski, Luiz Paulo Rogatto, Silvia Regina |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) A.C. Camargo Cancer Center CIPE – A.C. Camargo Cancer Center University of Southern Denmark |
dc.contributor.author.fl_str_mv |
Cury, Sarah Santiloni [UNESP] Lapa, Rainer Marco Lopez [UNESP] de Mello, Julia Bette Homem Marchi, Fábio Albuquerque Domingues, Maria Aparecida Custódio [UNESP] Pinto, Clóvis Antonio Lopes Carvalho, Robson Francisco [UNESP] de Carvalho, Genival Barbosa Kowalski, Luiz Paulo Rogatto, Silvia Regina |
dc.subject.por.fl_str_mv |
Biomarker Laryngeal squamous cell carcinoma Liquid biopsy Secretome Transcriptome |
topic |
Biomarker Laryngeal squamous cell carcinoma Liquid biopsy Secretome Transcriptome |
description |
Objectives: The tumor secretome deconvolution is a promising strategy to identify diagnostic and prognostic biomarkers. Here, transcriptomic-based secretome analysis was performed aiming to discover laryngeal squamous cell carcinomas (LSCC) biomarkers from potentially secreted proteins (PSPs). Material and Methods: The tumor expression profile (35 LSCC biopsies compared with surrounding normal tissues - SN) revealed 589 overexpressed genes. This gene list was used for secretome analysis based on laryngeal tumors and related secretome databases. Results: Forty-nine (Laryngeal tumor secretome database) and 50 (Human Protein Atlas and Cancer Secretome Database) PSPs presented an association with worse overall survival. Specifically, DSG2 overexpression was strongly correlated with poor survival and distant metastasis. DSG2 increased expression was confirmed in the LSCC dataset (LSCC = 111; SN = 12) from TCGA. A significant association between shorter survival and DSG2 overexpression was also detected. In an independent cohort of cases, we analyzed and confirmed high protein levels of DSG2 in plasma from LSCC patients. Conclusion: A set of PSPs including the circulating DSG2, were associated with shorter overall survival in LSCC. DSG2 overexpression was also correlated with distant metastasis. The high plasmatic protein levels of DSG2 suggest its potential to be tested in liquid biopsies and applied as prognostic biomarker of LSCC. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-12-12T02:35:43Z 2020-12-12T02:35:43Z 2020-04-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.oraloncology.2020.104592 Oral Oncology, v. 103. 1879-0593 1368-8375 http://hdl.handle.net/11449/201558 10.1016/j.oraloncology.2020.104592 2-s2.0-85079538957 |
url |
http://dx.doi.org/10.1016/j.oraloncology.2020.104592 http://hdl.handle.net/11449/201558 |
identifier_str_mv |
Oral Oncology, v. 103. 1879-0593 1368-8375 10.1016/j.oraloncology.2020.104592 2-s2.0-85079538957 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Oral Oncology |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128924529459200 |