Genomic and phylogenetic characterization of brazilian yellow fever virus strains
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Outros Autores: | , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/378 |
Resumo: | Globally, yellow fever virus infects nearly 200,000 people, leading to 30,000 deaths annually. Although the virus is endemic to Latin America, only a single genome from this region has been sequenced. Here, we report 12 Brazilian yellow fever virus completegenomes, their genetic traits, phylogenetic characterization, and phylogeographic dynamics. Variable 3= noncoding region (3=NCR) patterns and specific mutations throughout the open reading frame altered predicted secondary structures. Our findingssuggest that whereas the introduction of yellow fever virus in Brazil led to genotype I-predominant dispersal throughout South and Central Americas, genotype II remained confined to Bolivia, Peru, and the western Brazilian Amazon. |
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Nunes, Márcio Roberto TeixeiraPalacios, GustavoCardoso, Jedson FerreiraMartins, Lívia CaricioSousa Junior, Edivaldo CLima, Clayton P. S. deMedeiros, Daniele Barbosa de AlmeidaSavji, NazirDesai, AalokiRodrigues, Sueli GuerreiroCarvalho, Valéria LimaLipkin, W. Ian2016-01-26T11:22:40Z2016-01-26T11:22:40Z2012NUNES, Márcio Roberto Teixeira et al. Genomic and phylogenetic characterization of brazilian yellow fever virus strains. Journal of Virology, v. 86, n. 24, p. 13263-13271, Dec. 2012https://patua.iec.gov.br/handle/iec/37810.1128/JVI.00565-12Globally, yellow fever virus infects nearly 200,000 people, leading to 30,000 deaths annually. Although the virus is endemic to Latin America, only a single genome from this region has been sequenced. Here, we report 12 Brazilian yellow fever virus completegenomes, their genetic traits, phylogenetic characterization, and phylogeographic dynamics. Variable 3= noncoding region (3=NCR) patterns and specific mutations throughout the open reading frame altered predicted secondary structures. Our findingssuggest that whereas the introduction of yellow fever virus in Brazil led to genotype I-predominant dispersal throughout South and Central Americas, genotype II remained confined to Bolivia, Peru, and the western Brazilian Amazon.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Columbia University. New York, USA.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Columbia University. New York, USA.Columbia University. New York, USA.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Columbia University. New York, USA.application/pdfengAmerican Society for MicrobiologyGenomic and phylogenetic characterization of brazilian yellow fever virus strainsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleFebre Amarela / transmissãoVírus da Febre Amarelainfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALGenomic and phylogenetic characterization of brazilian yellow fever virus strains . pdfapplication/pdf2874212https://patua.iec.gov.br/bitstreams/5d1effb1-0b1b-422b-8364-560c22c73739/download10f7d345ad811672561ea5b875556c83MD51TEXTfile_1.pdf.txtfile_1.pdf.txtExtracted texttext/plain40671https://patua.iec.gov.br/bitstreams/14f35e48-8bef-41e5-a50c-acddb2ff0070/downloadee2c0c87f3949ba8fab275bba7f61c0aMD52Genomic and phylogenetic characterization of brazilian yellow fever virus strains . pdf.txtGenomic and phylogenetic characterization of brazilian yellow fever virus strains . pdf.txtExtracted texttext/plain42741https://patua.iec.gov.br/bitstreams/2e2b031c-e4fc-45f2-b7a2-45870d78604f/downloade5ec40bd22176521e95ceed310c38fa2MD57THUMBNAILfile_1.pdf.jpgfile_1.pdf.jpgIM Thumbnailimage/jpeg4723https://patua.iec.gov.br/bitstreams/3b03e71d-192c-454e-8fb3-25f1b8d238ae/download5cc3fa389a2f19c96eeb33efae264b01MD53Genomic and phylogenetic characterization of brazilian yellow fever virus strains . pdf.jpgGenomic and phylogenetic characterization of brazilian yellow fever virus strains . pdf.jpgGenerated Thumbnailimage/jpeg6024https://patua.iec.gov.br/bitstreams/5cb1c2a5-610c-402f-94c9-fc5f2f8e6247/download656da929f1d4d25696edef2af0d2a98dMD58LICENSElicense.txtlicense.txttext/plain; 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dc.title.pt_BR.fl_str_mv |
Genomic and phylogenetic characterization of brazilian yellow fever virus strains |
title |
Genomic and phylogenetic characterization of brazilian yellow fever virus strains |
spellingShingle |
Genomic and phylogenetic characterization of brazilian yellow fever virus strains Nunes, Márcio Roberto Teixeira Febre Amarela / transmissão Vírus da Febre Amarela |
title_short |
Genomic and phylogenetic characterization of brazilian yellow fever virus strains |
title_full |
Genomic and phylogenetic characterization of brazilian yellow fever virus strains |
title_fullStr |
Genomic and phylogenetic characterization of brazilian yellow fever virus strains |
title_full_unstemmed |
Genomic and phylogenetic characterization of brazilian yellow fever virus strains |
title_sort |
Genomic and phylogenetic characterization of brazilian yellow fever virus strains |
author |
Nunes, Márcio Roberto Teixeira |
author_facet |
Nunes, Márcio Roberto Teixeira Palacios, Gustavo Cardoso, Jedson Ferreira Martins, Lívia Caricio Sousa Junior, Edivaldo C Lima, Clayton P. S. de Medeiros, Daniele Barbosa de Almeida Savji, Nazir Desai, Aaloki Rodrigues, Sueli Guerreiro Carvalho, Valéria Lima Lipkin, W. Ian |
author_role |
author |
author2 |
Palacios, Gustavo Cardoso, Jedson Ferreira Martins, Lívia Caricio Sousa Junior, Edivaldo C Lima, Clayton P. S. de Medeiros, Daniele Barbosa de Almeida Savji, Nazir Desai, Aaloki Rodrigues, Sueli Guerreiro Carvalho, Valéria Lima Lipkin, W. Ian |
author2_role |
author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Nunes, Márcio Roberto Teixeira Palacios, Gustavo Cardoso, Jedson Ferreira Martins, Lívia Caricio Sousa Junior, Edivaldo C Lima, Clayton P. S. de Medeiros, Daniele Barbosa de Almeida Savji, Nazir Desai, Aaloki Rodrigues, Sueli Guerreiro Carvalho, Valéria Lima Lipkin, W. Ian |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Febre Amarela / transmissão Vírus da Febre Amarela |
topic |
Febre Amarela / transmissão Vírus da Febre Amarela |
description |
Globally, yellow fever virus infects nearly 200,000 people, leading to 30,000 deaths annually. Although the virus is endemic to Latin America, only a single genome from this region has been sequenced. Here, we report 12 Brazilian yellow fever virus completegenomes, their genetic traits, phylogenetic characterization, and phylogeographic dynamics. Variable 3= noncoding region (3=NCR) patterns and specific mutations throughout the open reading frame altered predicted secondary structures. Our findingssuggest that whereas the introduction of yellow fever virus in Brazil led to genotype I-predominant dispersal throughout South and Central Americas, genotype II remained confined to Bolivia, Peru, and the western Brazilian Amazon. |
publishDate |
2012 |
dc.date.issued.fl_str_mv |
2012 |
dc.date.accessioned.fl_str_mv |
2016-01-26T11:22:40Z |
dc.date.available.fl_str_mv |
2016-01-26T11:22:40Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
NUNES, Márcio Roberto Teixeira et al. Genomic and phylogenetic characterization of brazilian yellow fever virus strains. Journal of Virology, v. 86, n. 24, p. 13263-13271, Dec. 2012 |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/378 |
dc.identifier.doi.-.fl_str_mv |
10.1128/JVI.00565-12 |
identifier_str_mv |
NUNES, Márcio Roberto Teixeira et al. Genomic and phylogenetic characterization of brazilian yellow fever virus strains. Journal of Virology, v. 86, n. 24, p. 13263-13271, Dec. 2012 10.1128/JVI.00565-12 |
url |
https://patua.iec.gov.br/handle/iec/378 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
American Society for Microbiology |
publisher.none.fl_str_mv |
American Society for Microbiology |
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reponame:Repositório Digital do Instituto Evandro Chagas (Patuá) instname:Instituto Evandro Chagas (IEC) instacron:IEC |
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Instituto Evandro Chagas (IEC) |
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IEC |
institution |
IEC |
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Repositório Digital do Instituto Evandro Chagas (Patuá) |
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Repositório Digital do Instituto Evandro Chagas (Patuá) |
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